Job Description P21177 Confidence 98.04% Date Thu Jan 5 11:37:58 GMT 2012 Rank 267 Aligned Residues 126 % Identity 17% Template c1llcA_ PDB info PDB header:oxidoreductase(choh(d)-nad(a)) Chain: A: PDB Molecule:l-lactate dehydrogenase; PDBTitle: structure determination of the allosteric l-lactate dehydrogenase from2 lactobacillus casei at 3.0 angstroms resolution Resolution 3.00 Å

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		309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.			.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.
Predicted Secondary structure																															.	.
Query SS confidence																															.	.
Query Sequence		D	V	E	T	P	K	Q	A	A	V	L	G	A	G	I	M	G	G	G	I	A	Y	Q	S	A	W	K	G	V	.	.	P	V	V	M	K	D	I	N	D	K	S	L	T	L	G	M	T	E	A	A	K	L	L	N	K	Q	L	E	R	G	K	I	D	G	L	K	L	A	G	V	I	S	T	I	H	P	T	L	D
Query Conservation																															.	.
Alig confidence																															.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	D	K	D	H	Q	K	V	I	L	V	G	D	G	A	V	G	S	S	Y	A	F	A	M	V	L	Q	G	I	A	Q	E	I	G	I	V	D	I	F	K	D	K	T	K	G	D	A	I	D	L	S	N	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	P	F	T	S	P	K	K	I	Y	S	A	E
Template Known Secondary structure						S						S		T	T														T			S	S						S		S											T	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T	S					B				T
Template Predicted Secondary structure																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.															.	70	.	.	.	.	.	.	.	.	.	80	.
		387	.	.	390	.	.	.	.	.	.	.	.	.															400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.			.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.		.	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.																					.
Query SS confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.																					.
Query Sequence		Y	A	G	F	D	R	V	D	I	V	V	E	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	V	E	N	P	K	V	K	K	A	V	L	A	E	T	E	Q	K	V	R	Q	D	T	.	.	V	L	A	S	N	T	S	T	I	P	I	S	E	L	A	N	A	L	E	R	.	P	E	N	F	C	G	M
Query Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.																					.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.				.	.																					.
Template Conservation																																																.
Template Sequence		Y	S	D	A	K	D	A	D	L	V	V	I	T	A	G	A	P	K	Q	P	G	E	T	R	L	D	L	V	N	K	N	L	K	I	L	K	S	I	V	D	P	I	V	D	S	G	.	F	N	L	I	F	L	V	A	A	N	P	V	D	I	L	T	Y	A	T	W	K	L	S	G	F	P	K	N	R	V	V	G	S
Template Known Secondary structure		T	T	T	T	S	S		S					B	T				S	S		S	S	S		S	T					T	T	S	T	T	T	T	T	T						T	T	.			S					B		S	S																T	T	T
Template Predicted Secondary structure																																																.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130		.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions