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Job DescriptionP21177
Confidence98.45%DateThu Jan 5 11:37:58 GMT 2012
Rank233Aligned Residues125
% Identity17%Templatec1ez4B_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:lactate dehydrogenase; PDBTitle: crystal structure of non-allosteric l-lactate dehydrogenase2 from lactobacillus pentosus at 2.3 angstrom resolution
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   311........320.........330....... ..340.........350.........360.........370.........380........
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Query Sequence  ETPKQAAVLGAGIMGGGIAYQSAWKGV. . PVVMKDINDKSLTLGMTEAAKLLNKQLERGKIDGLKLAGVISTIHPTLDYA
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Template Sequence  PNHQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDA. . . . . . . . . . . . . . QAFTAPKKIYSGEYS
Template Known Secondary structure  TTB


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Query Sequence  GFDRVDIVVEAV. . . . . . . . . . . . . . VENPKVKKAVLAETEQKVRQDTVLA. SNTSTIPISELANALER. PENFCGM
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Template Sequence  DCKDADLVVITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAANPVDILTYATWKFSGFPKERVIGS
Template Known Secondary structure  GGTT
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   85....90.........100.........110.........120.........130.........140.........150.........160.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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