Job Description P21177 Confidence 99.02% Date Thu Jan 5 11:37:58 GMT 2012 Rank 179 Aligned Residues 201 % Identity 19% Template c1dliA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:udp-glucose dehydrogenase; PDBTitle: the first structure of udp-glucose dehydrogenase (udpgdh) reveals the2 catalytic residues necessary for the two-fold oxidation Resolution 2.31 Å

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		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.					.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.		.	.
Predicted Secondary structure																																										.	.	.	.																																		.
Query SS confidence																																										.	.	.	.																																		.
Query Sequence		Q	A	A	V	L	G	A	G	I	M	G	G	G	I	A	Y	Q	S	A	W	K	G	V	P	V	V	M	K	D	I	N	D	K	S	L	T	L	G	M	T	.	.	.	.	E	A	A	K	L	L	N	K	Q	L	E	R	G	K	I	D	G	L	K	L	A	G	V	I	S	T	I	H	P	T	L	D	Y	.	A	G
Query Conservation																																										.	.	.	.																																		.
Alig confidence																					.																					.	.	.	.																.	.	.	.	.	.	.	.	.	.									.
Template Conservation																					.																																								.	.	.	.	.	.	.	.	.	.
Template Sequence		K	I	A	V	A	G	S	G	Y	V	G	L	S	L	G	V	L	L	S	.	L	Q	N	E	V	T	I	V	D	I	L	P	S	K	V	D	K	I	N	N	G	L	S	P	I	Q	D	E	Y	I	E	Y	Y	L	K	S	K	Q	L	.	.	.	.	.	.	.	.	.	.	S	I	K	A	T	L	D	S	K	A	A
Template Known Secondary structure									S											T	.	T	T	S							S										T	T			S	S												S			.	.	.	.	.	.	.	.	.	.						S
Template Predicted Secondary structure																					.																																								.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20		.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.											60	.	.	.	.	.	.	.	.	.	70
		390	.	.	.	.	.	.	.	.	.	400	.	.										.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.										.	.	.	.	.	.	.	450	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.																																									.	.	.	.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.	.	.	.																																									.	.	.	.	.	.	.	.	.
Query Sequence		F	D	R	V	D	I	V	V	E	A	V	V	E	.	.	.	.	.	.	.	.	.	N	P	K	V	K	K	A	V	L	A	E	T	E	Q	K	V	R	Q	D	T	V	L	A	S	N	T	S	T	I	P	I	S	E	L	A	N	A	L	E	R	.	.	.	.	.	.	.	.	.	P	E	N	F	C	G	M	H	F
Query Conservation															.	.	.	.	.	.	.	.	.																																									.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.																								.	.																.	.	.	.	.	.	.	.	.
Template Conservation																																															.	.
Template Sequence		Y	K	E	A	E	L	V	I	I	A	T	P	T	N	Y	N	S	R	I	N	Y	F	D	T	Q	H	V	E	T	V	I	K	E	V	L	S	V	N	S	H	A	T	L	I	I	.	.	K	S	T	I	P	I	G	F	I	T	E	M	R	Q	K	F	Q	T	D	R	I	I	F	S	P	E	F	L	R	E	S	K	A
Template Known Secondary structure						S												T	T	T	T																			S	S						.	.		S				T	T										T		S											T	T	S	T
Template Predicted Secondary structure																																															.	.
Template SS confidence
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.			.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
		452	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.							.	.	.	.	490	.	.	.	.	.	.	.									.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.
Predicted Secondary structure																																				.	.	.	.	.	.													.	.	.	.	.	.	.	.																				.
Query SS confidence																																				.	.	.	.	.	.													.	.	.	.	.	.	.	.																				.
Query Sequence		F	N	P	V	H	R	M	P	L	V	E	I	I	R	G	E	K	S	S	D	E	T	I	A	K	V	V	A	W	A	S	K	M	G	.	.	.	.	.	.	K	T	P	I	V	V	N	D	C	P	G	F	.	.	.	.	.	.	.	.	F	V	N	R	V	L	F	P	Y	F	A	G	F	S	Q	L	L	R	D	.
Query Conservation																																				.	.	.	.	.	.													.	.	.	.	.	.	.	.																				.
Alig confidence																																				.	.	.	.	.	.													.	.	.	.	.	.	.	.																				.
Template Conservation
Template Sequence		L	Y	D	N	L	Y	P	S	R	I	I	V	S	C	E	E	N	D	S	P	K	V	K	A	D	A	E	K	F	A	L	L	L	K	S	A	A	K	K	N	N	V	P	V	L	I	M	G	A	S	E	A	E	A	V	K	L	F	A	N	T	Y	L	A	L	R	V	A	Y	F	N	E	L	D	T	Y	A	E	S	R
Template Known Secondary structure		T					S		S								T	T	S																				S	S	S																																								T
Template Predicted Secondary structure
Template SS confidence
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
		517	.	.	520	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	D	F	R	K	I	D	K	V	M	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	L	N	S	H	M	I	I	Q	G	I	S
Template Known Secondary structure		T
Template Predicted Secondary structure
Template SS confidence
		229	230	.	.	.	.	.	.	.	.	.	240

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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