Job Description P21177 Confidence 98.27% Date Thu Jan 5 11:37:58 GMT 2012 Rank 251 Aligned Residues 128 % Identity 15% Template c1b8vA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:protein (malate dehydrogenase); PDBTitle: malate dehydrogenase from aquaspirillum arcticum Resolution 2.10 Å

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		311	.	.	.	.	.	.	.	.	320	.		.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.								.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.
Predicted Secondary structure													.																	.	.	.	.	.	.	.
Query SS confidence													.																	.	.	.	.	.	.	.
Query Sequence		E	T	P	K	Q	A	A	V	L	G	A	.	G	I	M	G	G	G	I	A	Y	Q	S	A	W	K	G	V	.	.	.	.	.	.	.	P	V	V	M	K	D	I	N	D	K	S	L	T	L	G	M	T	E	A	A	K	L	L	N	K	Q	L	E	R	G	K	I	D	G	L	K	L	A	G	V	I	S	T	I	H
Query Conservation													.																	.	.	.	.	.	.	.
Alig confidence													.																	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.
Template Conservation																																																													.	.	.	.	.	.	.	.	.
Template Sequence		K	T	P	M	R	V	A	V	T	G	A	A	G	Q	I	C	Y	S	L	L	F	R	I	A	N	G	D	M	L	G	K	D	Q	P	V	I	L	Q	L	L	E	I	P	N	E	K	A	Q	K	A	L	Q	G	V	M	M	E	I	D	.	.	.	.	.	.	.	.	.	D	C	A	F	P	L	L	A	G	M	T	A
Template Known Secondary structure											S	T	T	S												T	T	T	T	T		T	T											S																	.	.	.	.	.	.	.	.	.	T	T	T		T	T
Template Predicted Secondary structure																																																													.	.	.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.										.	.	.	.	.	.	.	.	70	.	.	.
		383	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.															400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440						.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.																																										.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.																																										.	.	.	.	.
Query Sequence		P	T	L	D	Y	A	G	F	D	R	V	D	I	V	V	E	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	V	E	N	P	K	V	K	K	A	V	L	A	E	T	E	Q	K	V	R	Q	D	T	V	L	A	S	N	T	S	T	I	P	I	S	E	L	A	N	A	L	.	.	.	.	.	E	R	P
Query Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.																																										.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.										.	.	.	.	.
Template Conservation																																																															.	.
Template Sequence		H	A	D	P	M	T	A	F	K	D	A	D	V	A	L	L	V	G	A	R	P	R	G	P	G	M	E	R	K	D	L	L	E	A	N	A	Q	I	F	T	V	Q	G	K	A	I	D	A	V	A	S	R	N	I	K	V	L	V	V	G	N	.	.	P	A	N	T	N	A	Y	I	A	M	K	S	A	P	S	L	P
Template Known Secondary structure			S						T	T	T		S												T	T																									S		T	T							S	S	.	.	S											T		T	T	S
Template Predicted Secondary structure																																																															.	.
Template SS confidence
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.			.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
		444	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	N	F	C	G	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	K	N	F	T	A
Template Known Secondary structure		G	G	G
Template Predicted Secondary structure
Template SS confidence
		152	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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