Job Description P76280 Confidence 100.00% Date Thu Jan 5 12:21:33 GMT 2012 Rank 12 Aligned Residues 206 % Identity 16% Template c3n05B_ PDB info PDB header:ligase Chain: B: PDB Molecule:nh(3)-dependent nad(+) synthetase; PDBTitle: crystal structure of nh3-dependent nad+ synthetase from streptomyces2 avermitilis Resolution 2.35 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure																																																																														.	.	.	.
Query SS confidence																																																																														.	.	.	.
Query Sequence		M	S	F	W	K	V	A	A	A	Q	Y	E	P	R	K	T	S	L	T	E	Q	V	A	H	H	L	E	F	V	R	A	A	A	R	Q	Q	C	Q	L	L	V	F	P	S	L	S	L	L	G	C	D	Y	S	R	R	A	L	P	A	P	P	D	L	S	L	L	D	P	L	C	Y	A	A	T	T	W	.	.	.	.
Query Conservation																																																																														.	.	.	.
Alig confidence					.																																																																									.	.	.	.
Template Conservation					.
Template Sequence		L	Q	L	.	R	L	A	L	N	Q	I	D	S	T	V	G	D	I	A	G	N	A	E	A	I	L	R	W	T	R	H	S	A	E	Q	G	A	H	L	V	A	F	P	E	M	A	L	T	G	Y	P	V	E	D	L	A	L	R	S	S	F	V	E	A	S	R	T	A	L	R	E	L	A	A	R	L	A	E	E	G
Template Known Secondary structure		B			.											T	T																		T	T	T		S						T	T	T	T	T		S			G	G	G	G	G																						T	T
Template Predicted Secondary structure					.
Template SS confidence
		1	.	.		.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
				77	.	.	80	.	.	.	.	.	.	.											.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.																						.	.	120	.	.	.
Predicted Secondary structure		.	.												.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.												.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	R	M	T	I	I	A	G	L	P	V	E	.	.	.	.	.	.	.	.	.	.	Y	N	D	R	F	I	R	G	I	A	V	F	A	P	W	R	K	T	P	G	I	Y	H	Q	S	H	G	A	C	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	R	R	S	R	T
Query Conservation		.	.												.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.												.	.	.	.	.	.	.	.	.	.															.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																							.
Template Sequence		F	G	E	L	P	V	L	V	G	Y	L	D	R	S	E	S	A	Q	P	K	Y	G	Q	P	A	G	A	P	R	N	A	A	A	V	L	H	R	.	G	R	V	A	L	T	F	A	K	H	H	L	P	N	Y	G	V	F	D	E	F	R	Y	F	V	P	G	D	T	M	P	I	V	R	L	H	G	V	D	I	A	L
Template Known Secondary structure			T	T	S											S	S		B	T	T	T	T	B		T	T											T	.	T													S	S	S	S																			T	T
Template Predicted Secondary structure																																							.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.		.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		124	.	.	.	.	.	130	.	.	.						.	.	.	.	.	.	140	.	.	.	.	.	.		.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.										.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure												.	.	.	.	.														.																																	.	.	.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.														.																																	.	.	.	.	.	.	.	.	.
Query Sequence		I	T	V	V	D	E	Q	P	Q	G	.	.	.	.	.	M	D	M	D	P	T	C	S	L	F	T	T	G	.	Q	C	L	G	E	P	D	L	L	A	S	A	R	R	L	Q	F	F	S	H	Q	Y	S	I	A	V	L	M	A	N	A	R	.	.	.	.	.	.	.	.	.	G	N	S	A	L	W	D	E	Y	G
Query Conservation												.	.	.	.	.														.																																	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.														.																																	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	I	C	E	D	L	W	Q	D	G	G	R	V	P	A	A	R	S	A	G	A	G	L	L	L	S	V	N	A	S	P	Y	E	R	D	K	D	D	T	R	L	E	L	V	R	K	R	A	Q	E	A	G	C	T	T	A	Y	L	A	M	I	G	G	Q	D	E	L	V	F	D	G	D	S	I	V	V	D	R	D	G
Template Known Secondary structure				G	G	G	G	G	S	T	T	S							T	T	T		S									B					S	S															T	S												T	T					B							S	S	S
Template Predicted Secondary structure
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		189	190	.	.	.	.	.	.		.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure										.
Query SS confidence										.
Query Sequence		R	L	I	V	R	A	D	R	.	G	S	L	L	L	V	G	Q	R	S	S	Q
Query Conservation										.
Alig confidence										.
Template Conservation
Template Sequence		E	V	V	A	R	A	P	Q	F	S	E	G	C	V	V	L	D	L	D	L	P
Template Known Secondary structure									B	S	S										B
Template Predicted Secondary structure
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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