Job Description P76280 Confidence 100.00% Date Thu Jan 5 12:21:33 GMT 2012 Rank 14 Aligned Residues 191 % Identity 17% Template c3ilvA_ PDB info PDB header:ligase Chain: A: PDB Molecule:glutamine-dependent nad(+) synthetase; PDBTitle: crystal structure of a glutamine-dependent nad(+) synthetase2 from cytophaga hutchinsonii Resolution 1.79 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.		.	.	.	80
Predicted Secondary structure																																																																													.
Query SS confidence																																																																													.
Query Sequence		S	F	W	K	V	A	A	A	Q	Y	E	P	R	K	T	S	L	T	E	Q	V	A	H	H	L	E	F	V	R	A	A	A	R	Q	Q	C	Q	L	L	V	F	P	S	L	S	L	L	G	C	D	Y	S	R	R	A	L	P	A	P	P	D	L	S	L	L	D	P	L	C	Y	A	A	T	T	W	.	R	M	T	I
Query Conservation																																																																													.
Alig confidence																																																																													.
Template Conservation
Template Sequence		S	T	I	R	I	G	G	A	A	V	N	Q	T	P	I	D	W	E	N	N	V	K	N	I	L	D	A	I	E	E	A	K	N	A	N	V	E	I	L	C	L	P	E	L	C	I	T	G	Y	G	C	E	D	L	F	L	T	D	W	V	A	E	T	A	I	E	Y	C	F	E	I	A	A	S	C	T	D	I	T	V
Template Known Secondary structure															T	T																			T	T		S						T	T	T	T	T		S			G	G	G	G	G	S																T	T		T	T	S
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.																																						.	.	120	.	.	.
Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	A	G	L	P	V	E	Y	N	D	R	F	I	R	G	I	A	V	F	A	P	W	R	K	T	P	G	I	Y	H	Q	S	H	G	A	C	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	R	R	S	R	T
Query Conservation																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																							.
Template Sequence		S	L	G	L	P	X	R	I	A	G	I	T	Y	N	C	V	C	L	V	E	N	.	G	I	V	K	G	F	S	A	K	Q	F	L	A	N	E	G	V	H	Y	E	T	R	W	F	T	A	W	P	R	N	H	T	T	T	F	L	Y	N	D	V	K	Y	P	F	G	D	V	L	Y	N	V	K	D	A	R	I	G	F
Template Known Secondary structure										T	T											T	.	T									S	S				S	T	T			G	G	G	T						T	T								T	T							S						T	T
Template Predicted Secondary structure																							.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.		.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.		.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.										.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure																									.																																	.	.	.	.	.	.	.	.	.
Query SS confidence																									.																																	.	.	.	.	.	.	.	.	.
Query Sequence		I	T	V	V	D	E	Q	P	Q	G	M	D	M	D	P	T	C	S	L	F	T	T	G	.	Q	C	L	G	E	P	D	L	L	A	S	A	R	R	L	Q	F	F	S	H	Q	Y	S	I	A	V	L	M	A	N	A	R	.	.	.	.	.	.	.	.	.	G	N	S	A	L	W	D	E	Y	G	R	L	I	V	R
Query Conservation																									.																																	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.										.																																	.	.	.	.	.	.	.	.	.
Template Conservation											.	.	.	.	.
Template Sequence		E	I	C	E	D	H	Y	E	K	.	.	.	.	.	G	A	T	L	V	L	N	P	S	A	S	H	F	A	F	G	K	S	A	I	R	Y	D	L	V	I	G	G	S	E	R	F	D	C	T	Y	V	Y	A	N	L	L	G	N	E	A	G	R	X	I	Y	D	G	E	V	L	I	A	H	K	G	K	L	I	Q	R
Template Known Secondary structure				T	T			G	G	G	.	.	.	.	.	T		S									B			T	T																T	T	S											S	S	S	S												T	T
Template Predicted Secondary structure											.	.	.	.	.
Template SS confidence
		161	.	.	.	.	.	.	.	.						170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
		194	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	D	R	G	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	D	R	L	S
Template Known Secondary structure				S	S
Template Predicted Secondary structure
Template SS confidence
		246	.	.	.	250

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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