Job Description P76280 Confidence 100.00% Date Thu Jan 5 12:21:33 GMT 2012 Rank 9 Aligned Residues 207 % Identity 17% Template c3hkxA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:amidase; PDBTitle: crystal structure analysis of an amidase from nesterenkonia sp. Resolution 1.66 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.			.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																							.	.
Query SS confidence																																																							.	.
Query Sequence		S	F	W	K	V	A	A	A	Q	Y	E	P	R	K	T	S	L	T	E	Q	V	A	H	H	L	E	F	V	R	A	A	A	R	Q	Q	C	Q	L	L	V	F	P	S	L	S	L	L	G	C	D	Y	S	R	.	.	R	A	L	P	A	P	P	D	L	S	L	L	D	P	L	C	Y	A	A	T	T	W	R	M	T
Query Conservation																																																							.	.
Alig confidence																																																							.	.
Template Conservation
Template Sequence		S	H	M	R	I	A	L	M	Q	H	T	A	R	P	L	D	P	Q	H	N	L	D	L	I	D	D	A	A	A	R	A	S	E	Q	G	A	Q	L	L	L	T	P	E	L	F	G	F	G	Y	V	P	S	Q	I	C	A	Q	V	S	A	E	Q	V	D	A	A	R	S	R	L	R	G	I	A	R	D	R	G	I	A
Template Known Secondary structure											B				T	T																			T	T		S						T	T	G	G	G		S																												T	T	S
Template Predicted Secondary structure
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90		.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.																				.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
Predicted Secondary structure													.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.
Query SS confidence													.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.
Query Sequence		I	I	A	G	L	P	V	E	Y	N	D	.	R	F	I	R	G	I	A	V	F	A	P	W	R	K	T	P	G	I	Y	H	Q	S	H	G	A	C	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	R	R	S	R	T	I	T	V	V	D	E	Q	P	Q	G	M	D	M	D	P	.
Query Conservation													.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.
Alig confidence													.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.
Template Conservation
Template Sequence		L	V	W	S	L	P	G	P	E	G	P	E	Q	R	G	I	T	A	E	L	A	D	E	H	G	E	V	L	A	S	Y	Q	K	V	Q	L	Y	G	P	E	E	K	A	A	F	V	P	G	E	Q	P	P	P	V	L	S	W	G	G	R	Q	L	S	L	L	V	C	Y	D	V	E	F	P	E	M	V	R	A	A	A
Template Known Secondary structure							B		S	S		T	T	T			B							T	T	S									S	S										S					S								T	T								G	G	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
				139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.										.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure		.	.																																									.	.	.	.	.	.	.	.	.
Query SS confidence		.	.																																									.	.	.	.	.	.	.	.	.
Query Sequence		.	.	T	C	S	L	F	T	T	G	Q	C	L	G	E	P	D	L	L	A	S	A	R	R	L	Q	F	F	S	H	Q	Y	S	I	A	V	L	M	A	N	A	R	.	.	.	.	.	.	.	.	.	G	N	S	A	L	W	D	E	Y	G	R	L	I	V	R	A	D	R	G	S	L	L	L	V	G	Q	R	S	S
Query Conservation		.	.																																									.	.	.	.	.	.	.	.	.
Alig confidence		.	.																																									.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	R	G	A	Q	L	V	L	V	P	T	A	L	A	G	D	E	T	S	V	P	G	I	L	L	P	A	R	A	V	E	N	G	I	T	L	A	Y	A	N	H	C	G	P	E	G	G	L	V	F	D	G	G	S	V	V	V	G	P	A	G	Q	P	L	G	E	L	G	V	E	P	G	L	L	V	V	D	L	P	D
Template Known Secondary structure			T	T		S									B	S			T					T										T								B					T	T												T	T	S								S	S
Template Predicted Secondary structure
Template SS confidence
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
		208
Predicted Secondary structure
Query SS confidence
Query Sequence		Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		269

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions