 |
Job Description | P76280 | Confidence | 21.38% | Date | Thu Jan 5 12:21:33 GMT 2012 |
Rank | 53 | Aligned Residues | 54 |
% Identity | 11% | Template | c3fkkA_ |
PDB info |
PDB header:lyase | Chain: A: PDB Molecule:l-2-keto-3-deoxyarabonate dehydratase; |
PDBTitle: structure of l-2-keto-3-deoxyarabonate dehydratase
|
Resolution | 2.10 Å |
|
 |
  |   |
21 | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | |
. | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | V | A | H | H | L | E | F | V | R | A | A | A | R | Q | Q | C | . |
Q | L | L | V | F | P | S | L | S | L | L | G | C | D | Y | S | R | R | A | L | P | A | P | P | D | L | S | L | L | D | P | L | C | Y | A | A | T | T | W | R | M | T | I | I | A |
Query Conservation |   |
|
|   |   |   |   |   |   |
|   |   |
|
|   |   |
|
| . |   |
|
|
|
|
|
|   |   |
|
|
|
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |
|   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |
|   |   |
|   |   |
|   |   |   |
|
|   |
|
|   |
|   |
|
|   |
|   |   |   |   |   |   |
| . | . | . | . | . | . | . | . |   |   |   |
|   |   |   |   |   |   |
|
|   |
|   |   |   |
|
|
|
|
Template Sequence |   |
S | T | Q | V | C | A | A | R | S | L | R | A | Q | Q | L | G | A | A | M | V | M | A | M | P | P | Y | H | G | A | T | F | R | V | P | . |
. |
. |
. |
. |
. |
. |
. |
E | A | Q | I | F | E | F | Y | A | R | V | S | D | A | I | A | I | P | I | M | V |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  |
|
| S |
| B | T | T | T | B |
|
|
| . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| S | S |
|  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
99 | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | |
|
|
|
|
|
|
|
. | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|