Return to main results Retrieve Phyre Job Id

Job DescriptionP76280
Confidence100.00%DateThu Jan 5 12:21:33 GMT 2012
Rank6Aligned Residues203
% Identity16%Templatec2w1vA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:nitrilase homolog 2; PDBTitle: crystal structure of mouse nitrilase-2 at 1.4a resolution
Resolution1.49 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.... .....60.........70.........
Predicted Secondary structure 





















.








Query SS confidence 





















































.
























Query Sequence  MSFWKVAAAQYEPRKTSLTEQVAHHLEFVRAAARQQCQLLVFPSLSLLGCDYSR. RALPAPPDLSLLDPLCYAATTWRMT
Query Conservation 
   


  
     

   

      
  

  

 





  



    .   
          
   
    
 
Alig confidence 













.






































.
























Template Conservation 
   


  
    .     
   
  
   
   





 

  
 
                    
   
    
 
Template Sequence  MSTFRLALIQLQVS. SIKSDNLTRACSLVREAAKQGANIVSLPECFNSPYGTTYFPDYAEKIPGESTQKLSEVAKESSIY
Template Known Secondary structure 





.S
TT
S

TTTTS

STTT
B
SSSTS
Template Predicted Secondary structure 






.




















Template SS confidence 















































































   3940.........50.. .......60.........70.........80.........90.........100.........110.......
 
   80... ......90.........100.........110....... ..120.........130..
Predicted Secondary structure  .











..........................



Query SS confidence 



.

































. . . . . . . . . . . . . . . . . . . . . . . . . .














Query Sequence  IIAG. LPVEYNDRFIRGIAVFAPWRKTPGIYHQSHGACL. . . . . . . . . . . . . . . . . . . . . . . . . . GRRSRTITVVDEQPQ
Query Conservation 
  
.          
    
   
     
 
      ..........................   

  

 
   
Alig confidence 



.

































..........................














Template Conservation 
              

   
   
 
   
 
  
            
      
    
       

  

 
   
Template Sequence  LIGGSIPEEDAGKLYNTCSVFGPDGSLLVKHRKIHLFDIDVPGKITFQESKTLSPGDSFSTFDTPYCKVGLGICYDMRFA
Template Known Secondary structure 


TT
TTS

SS

TTTGGGT








SS


GGGGG
Template Predicted Secondary structure 


































Template SS confidence 















































































   118.120.........130.........140.........150.........160.........170.........180.........190.......
 
   133... ...140.........150.........160.........170......... 180.........190........
Predicted Secondary structure  ....





















..........










Query SS confidence 



. . . .










































. . . . . . . . . .


















Query Sequence  GMDM. . . . DPTCSLFTTGQCLGEPDLLASARRLQFFSHQYSIAVLMANARG. . . . . . . . . . NSALWDEYGRLIVRADRGS
Query Conservation 
   ....     
                     

 

   

 

  
.......... 
 
 
  
         
Alig confidence 



....










































..........


















Template Conservation 
  
     

 


  
                 

 

   

 

  
         
 
 
  
 
  

     
Template Sequence  ELAQIYAQRGCQLLVYPGAFNLTTGPAHWELLQRARAVDNQVYVATASPARDDKASYVAWGHSTVVDPWGQVLTKAGTEE
Template Known Secondary structure  TT



TTT





TTSSS






TTS


SSS
Template Predicted Secondary structure 
































Template SS confidence 















































































   198.200.........210.........220.........230.........240.........250.........260.........270.......
 
   199200....
Predicted Secondary structure 
Query SS confidence 





Query Sequence  LLLVGQ
Query Conservation   


  
Alig confidence 





Template Conservation   
   
Template Sequence  TILYSD
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 





   278.280...
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions