Job Description P76280 Confidence 100.00% Date Thu Jan 5 12:21:33 GMT 2012 Rank 2 Aligned Residues 205 % Identity 12% Template c2e2kC_ PDB info PDB header:hydrolase Chain: C: PDB Molecule:formamidase; PDBTitle: helicobacter pylori formamidase amif contains a fine-tuned cysteine-2 glutamate-lysine catalytic triad Resolution 2.50 Å

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		4	.	.	.	.	.	10	.	.	.	.	.					.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.			.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.				.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure														.	.	.	.																					.	.																			.	.	.
Query SS confidence														.	.	.	.																					.	.																			.	.	.
Query Sequence		W	K	V	A	A	A	Q	Y	E	P	R	K	.	.	.	.	T	S	L	T	E	Q	V	A	H	H	L	E	F	V	R	A	A	A	R	Q	.	.	Q	C	Q	L	L	V	F	P	S	L	S	L	L	G	C	D	Y	S	.	.	.	R	R	A	L	P	A	P	P	D	L	S	L	L	D	P	L	C	Y	A	A	T
Query Conservation														.	.	.	.																					.	.																			.	.	.
Alig confidence														.	.	.	.																					.	.																			.	.	.
Template Conservation
Template Sequence		F	L	V	A	A	I	Q	F	P	V	P	I	V	N	S	R	K	D	I	D	H	N	I	E	S	I	I	R	T	L	H	A	T	K	A	G	Y	P	G	V	E	L	I	I	F	P	E	Y	S	T	Q	G	L	N	T	A	K	W	L	S	E	E	F	L	L	D	V	P	G	K	E	T	E	L	Y	A	K	A	C	K
Template Known Secondary structure																S																							T	T								T	T	T	T	T				T	T	T	T	T	S	G	G	G		B		S	S	S
Template Predicted Secondary structure
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
		75	.	.	.	.	80	.	.	.	.	.	.	.				.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.																			.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
Predicted Secondary structure															.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence															.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	W	R	M	T	I	I	A	G	L	P	V	E	.	.	.	Y	N	D	R	F	I	R	G	I	A	V	F	A	P	W	R	K	T	P	G	I	Y	H	Q	S	H	G	A	C	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	R	R	S	R	T	I	T	V	V	D	E	Q	P	Q	G
Query Conservation															.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	A	K	V	Y	G	V	F	S	I	M	E	R	N	P	D	S	N	K	N	P	Y	N	T	A	I	I	I	D	P	Q	G	E	I	I	L	K	Y	R	K	L	F	P	W	N	P	I	E	P	W	Y	P	G	D	L	G	M	P	V	C	E	G	P	G	G	S	K	L	A	V	C	I	S	H	D	G	M	I	P	E
Template Known Secondary structure				T												S	S	T	T	S											T	T	S									S	S			T	T	T				B			S	S								G	G	G								G	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
		134	.	.	.	.				.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180									.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.		.	200	.
Predicted Secondary structure							.	.	.																																											.	.	.	.	.	.	.	.																			.
Query SS confidence							.	.	.																																											.	.	.	.	.	.	.	.																			.
Query Sequence		M	D	M	D	P	.	.	.	T	C	S	L	F	T	T	G	Q	C	L	G	E	P	D	L	L	A	S	A	R	R	L	Q	F	F	S	H	Q	Y	S	I	A	V	L	M	A	N	A	R	G	N	.	.	.	.	.	.	.	.	S	A	L	W	D	E	Y	G	R	L	I	V	R	A	D	R	G	S	.	L	L	L
Query Conservation							.	.	.																																											.	.	.	.	.	.	.	.																			.
Alig confidence							.	.	.																																											.	.	.	.	.	.	.	.																			.
Template Conservation
Template Sequence		L	A	R	E	A	A	Y	K	G	C	N	V	Y	I	R	I	S	G	Y	S	T	Q	V	N	D	Q	W	I	L	T	N	R	S	N	A	W	H	N	L	M	Y	T	V	S	V	N	L	A	G	Y	D	N	F	Y	Y	F	G	E	G	Q	I	C	N	F	D	G	T	T	L	V	Q	G	H	R	N	P	W	E	I	V
Template Known Secondary structure									T	T		S										S	S	S														T	T	T									S		S														T	T	S								S		T	T
Template Predicted Secondary structure
Template SS confidence
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
		202	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	G	Q	R	S	S	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	G	E	I	Y	P	K
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		255	.	.	.	.	260	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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