Job Description P76280 Confidence 100.00% Date Thu Jan 5 12:21:33 GMT 2012 Rank 4 Aligned Residues 202 % Identity 13% Template c1emsB_ PDB info PDB header:antitumor protein Chain: B: PDB Molecule:nit-fragile histidine triad fusion protein; PDBTitle: crystal structure of the c. elegans nitfhit protein Resolution 2.80 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.			.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																							.	.
Query SS confidence																																																							.	.
Query Sequence		S	F	W	K	V	A	A	A	Q	Y	E	P	R	K	T	S	L	T	E	Q	V	A	H	H	L	E	F	V	R	A	A	A	R	Q	Q	C	Q	L	L	V	F	P	S	L	S	L	L	G	C	D	Y	S	R	.	.	R	A	L	P	A	P	P	D	L	S	L	L	D	P	L	C	Y	A	A	T	T	W	R	M	T
Query Conservation																																																							.	.
Alig confidence														.																																									.	.
Template Conservation														.
Template Sequence		G	R	H	F	I	A	V	C	Q	M	T	S	.	D	N	D	L	E	K	N	F	Q	A	A	K	N	M	I	E	R	A	G	E	K	K	C	E	M	V	F	L	P	E	C	F	D	F	I	G	L	N	K	N	E	Q	I	D	L	A	M	A	T	D	C	E	Y	M	E	K	Y	R	E	L	A	R	K	H	N	I	W
Template Known Secondary structure		S									B			.		S																			T	T		S							T		S				S	S	T	T	T	T	T	T	S		B		S	S	S													T	T
Template Predicted Secondary structure														.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.		.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
		80	.	.	.	.	.	.	.					.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.																												.	.	120	.	.	.	.	.	.	.	.
Predicted Secondary structure										.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence										.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	I	A	G	L	P	V	E	.	.	.	.	Y	N	D	R	F	I	R	G	I	A	V	F	A	P	W	R	K	T	P	G	I	Y	H	Q	S	H	G	A	C	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	R	R	S	R	T	I	T	V	V	D
Query Conservation										.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	S	L	G	G	L	H	H	K	D	P	S	D	A	A	H	P	W	N	T	H	L	I	I	D	S	D	G	V	T	R	A	E	Y	N	K	L	H	L	F	D	L	E	I	P	G	K	V	R	L	M	E	S	E	F	S	K	A	G	T	E	M	I	P	P	V	D	T	P	I	G	R	L	G	L	S	I	C	Y	D
Template Known Secondary structure												S	S		T	T	S										S	S	S																	T	T	T										B				S								T	T								G	G	G
Template Predicted Secondary structure
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
		129	130	.	.	.	.	.	.					.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.											.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
Predicted Secondary structure										.	.	.	.																																											.	.	.	.	.	.	.	.	.	.
Query SS confidence										.	.	.	.																																											.	.	.	.	.	.	.	.	.	.
Query Sequence		E	Q	P	Q	G	M	D	M	.	.	.	.	D	P	T	C	S	L	F	T	T	G	Q	C	L	G	E	P	D	L	L	A	S	A	R	R	L	Q	F	F	S	H	Q	Y	S	I	A	V	L	M	A	N	A	R	.	.	.	.	.	.	.	.	.	.	G	N	S	A	L	W	D	E	Y	G	R	L	I	V	R	A
Query Conservation										.	.	.	.																																											.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.																																											.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	R	F	P	E	L	S	L	W	N	R	K	R	G	A	Q	L	L	S	F	P	S	A	F	T	L	N	T	G	L	A	H	W	E	T	L	L	R	A	R	A	I	E	N	Q	C	Y	V	V	A	A	A	Q	T	G	A	H	N	P	K	R	Q	S	Y	G	H	S	M	V	V	D	P	W	G	A	V	V	A	Q	C
Template Known Secondary structure		G	G											T	T		S						B			B																				T							B	B						T	T												T	T	S
Template Predicted Secondary structure
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
		195	.	.	.	.	200	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	R	G	S	L	L	L	V	G	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	E	R	V	D	M	C	F	A	E
Template Known Secondary structure			S	S	S
Template Predicted Secondary structure
Template SS confidence
		252	.	.	.	.	.	.	.	260	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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