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2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | |
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. | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | |
70 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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| . | . |
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|  |  |  |  |  |  |
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Query SS confidence |   |
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Query Sequence |   |
A | A | L | T | A | S | C | I | D | L | N | I | Q | G | N | G | A | Y | S | V | L | K | Q | L | A | T | I | A | L | Q | N | G | F | I | T | D | S | H | Q | F | L | Q | T | L | L | L | R | E | K | M | H | S | T | . |
. |
G | F | G | S | G | V | A | V | P | H | G | K | S | A | C | . |
V | K | Q | P | F | V | L | F | A |
Query Conservation |   |
  |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |
|   |
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|   |   |   |   |   |   |   |   |   |
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|   |   |   |   |
| . | . |   |
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|   |   |   |   |   | . |
|   |   |   |   |
|   |
|   |
Alig confidence |   |
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| . | . |
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Template Conservation |   |
  |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |
|   |   |   |   |   |
|   | . | . |   |   |   |   |   |   |
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|   |   |   |   |   |   |
|   |   |   |   |
|   |
|   |
Template Sequence |   |
D | Y | F | P | E | S | S | I | S | V | I | H | S | A | K | D | W | Q | E | A | I | D | F | S | M | V | S | L | L | D | K | N | Y | I | S | . |
. |
E | N | Y | I | Q | A | I | K | D | S | T | I | N | N | G | P | Y | Y | I | L | A | P | G | V | A | M | P | H | A | R | P | E | C | G | A | L | K | T | G | M | S | L | T |
Template Known Secondary structure |   |
G | G |
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| S | T | T |  |  |  |  | S |
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| S | S |  |  |  |  |  |  |  | T | T |  |  |  |  | T | T | T | S | B |
| . | . |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
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| S |
|  |  |  | T | T |  |  |
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| G | G | G | T | B |
| S |
|  |  |  |  |  |
Template Predicted Secondary structure |   |
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| . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Template SS confidence |   |
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  |   |
5 | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | |
|
40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . |
  |
  |   |
79 | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | |
. | . | . | . | 140 | . | . | . | . |
Predicted Secondary structure |   |
 |  |
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|  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |
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| . |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
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| . |
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Query Sequence |   |
R | K | A | Q | A | I | D | W | K | A | S | D | G | E | D | V | N | C | W | I | C | L | G | V | P | Q | S | G | E | E | D | Q | V | K | I | I | G | T | L | C | R | K | I | I | H | K | E | F | I | H | Q | L | Q | Q | G | D | T | . |
D | Q | V | L | A | L | L | N | Q |
Query Conservation |   |
  |
|   |   |
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|   |   |   |   |   |
|   |   |   |
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|   |
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|   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |   |   | . |   |
|   |   |   |   |
|   |   |
Alig confidence |   |
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Template Conservation |   |
  |
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|   |
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|   |   |   |   | . |   |   |   |   |
|   |   |
|   |   |
|   |   |   |   | . | . |   |   |   |   |
|   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |
Template Sequence |   |
L | L | E | Q | G | V | Y | F | P | G | . |
N | D | E | P | I | K | L | L | I | G | L | S | A | A | D | . |
. |
A | D | S | H | I | G | A | I | Q | A | L | S | E | L | L | C | E | E | E | I | L | E | Q | L | L | T | A | S | S | E | K | Q | L | A | D | I | I | S | R |
Template Known Secondary structure |   |
 |  |  |  |  |  |
|
| T | T | . |
| S | S |
|  |  |  |  |  |  |  |  |
| S | S | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|  |  |  |  |  |  |  |  | T |
|
| S |  |  |  |  |  |  |  |  |  | T |
Template Predicted Secondary structure |   |
 |  |
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|  |  |  |
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| . |
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|
|  |  |  |  |  |  |  |  |  |
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| . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
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  |   |
83 | . | . | . | . | . | . | 90 | . | . | |
. | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | |
|
. | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . |
  |