Job Description P75788 Confidence 0.73% Date Thu Jan 5 12:14:09 GMT 2012 Rank 42 Aligned Residues 196 % Identity 9% Template c3rkoL_ PDB info PDB header:oxidoreductase Chain: L: PDB Molecule:nadh-quinone oxidoreductase subunit l; PDBTitle: crystal structure of the membrane domain of respiratory complex i from2 e. coli at 3.0 angstrom resolution Resolution 3.00 Å

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		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.			.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure																																													.	.
Query SS confidence																																													.	.
Query Sequence		F	F	Q	L	L	I	L	V	G	I	G	L	S	F	F	V	P	F	A	P	K	S	W	P	A	A	I	D	W	H	T	I	I	T	L	S	G	L	M	L	L	T	K	.	.	G	V	E	L	S	G	Y	F	D	V	L	G	R	K	M	V	R	R	F	A	T	E	R	R	L	A	M	F	M	V	L	A	A	A	L
Query Conservation																																													.	.
Alig confidence																																													.	.
Template Conservation
Template Sequence		I	H	A	A	T	M	V	T	A	G	V	Y	L	I	A	R	T	H	G	L	F	L	M	T	P	E	V	L	H	L	V	G	I	V	G	A	V	T	L	L	L	A	G	F	A	A	L	V	Q	T	D	I	K	R	V	L	A	Y	S	T	M	S	Q	I	G	Y	M	F	L	A	L	G	V	Q	A	W	D	A	A	I
Template Known Secondary structure					T	T												T						T	S																							T	T		S	B																						T	T
Template Predicted Secondary structure
Template SS confidence
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.							.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.		.								.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure																																			.	.	.	.	.	.																					.		.	.	.	.	.	.	.
Query SS confidence																																			.	.	.	.	.	.																					.		.	.	.	.	.	.	.
Query Sequence		L	S	T	F	L	T	N	D	V	A	L	F	I	V	V	P	L	T	I	T	L	K	R	L	C	E	I	P	V	N	R	L	I	.	.	.	.	.	.	I	F	E	A	L	A	V	N	A	G	S	L	L	T	P	I	G	N	P	Q	.	N	.	.	.	.	.	.	.	I	L	I	W	G	R	S	G	L	S	F	A
Query Conservation																																			.	.	.	.	.	.																					.		.	.	.	.	.	.	.
Alig confidence																																			.	.	.	.	.	.																					.		.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	H	L	M	T	H	A	F	F	K	A	L	L	F	L	A	S	G	S	V	I	L	A	C	H	H	E	Q	N	I	F	K	M	G	G	L	R	K	S	I	P	L	V	Y	L	C	F	L	V	G	G	A	A	L	S	A	L	P	L	V	T	A	G	F	F	S	K	D	E	I	L	A	G	A	M	A	N	G	H	I
Template Known Secondary structure																									T	T	S			B	S	T	T					T	T	T																	T		S	S	S	B															T	T	T
Template Predicted Secondary structure
Template SS confidence
		333	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	F	I	A	Q	M	A	P	L	A	G	A	M	M	L	T	L	L	L	L	C	W	C	C	F	P	G	K	A	M	Q	Y	H	T	G	V	Q	T	P	E	W	K	P	R	L	V	W	S	C	L	G	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	L	M	V	A	G	L	V	G	A	F	M	T	S	L	Y	T	F	R	M	I	F	I	V	F	H	G	K	E	Q	I	H	A	H	A	V	K	G	V	T	H	S	L	P	L	I	V	L	L	I	L	S
Template Known Secondary structure																											S	S				S
Template Predicted Secondary structure
Template SS confidence
		413	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions