Job Description P75788 Confidence 0.50% Date Thu Jan 5 12:14:09 GMT 2012 Rank 67 Aligned Residues 146 % Identity 11% Template c3nd0A_ PDB info PDB header:transport protein Chain: A: PDB Molecule:sll0855 protein; PDBTitle: x-ray crystal structure of a slow cyanobacterial cl-/h+ antiporter Resolution 3.20 Å

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		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.								.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
Predicted Secondary structure																																	.	.	.	.	.	.	.
Query SS confidence																																	.	.	.	.	.	.	.
Query Sequence		I	P	V	N	R	L	I	I	F	E	A	L	A	V	N	A	G	S	L	L	T	P	I	G	N	P	Q	N	I	L	I	.	.	.	.	.	.	.	W	G	R	S	G	L	S	F	A	G	F	I	A	Q	M	A	P	L	A	G	A	M	M	L	T	L	L	L	L	C	W	C	C	F	P	G	K	A	M	Q	Y	H
Query Conservation																																	.	.	.	.	.	.	.
Alig confidence																																	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	H	P	R	T	L	V	A	A	I	V	V	G	L	I	T	G	V	L	G	A	G	F	K	S	A	V	N	N	M	L	Q	W	R	S	Q	L	A	Q	I	L	A	P	I	P	P	L	A	W	L	V	T	A	L	I	S	G	G	M	V	A	L	S	F	W	L	M	K	R	F	A	P	D	T	S	G	S	G	I	P
Template Known Secondary structure																																										S	T	T	S		T																						T	T	T		G	G	G	S	B		S
Template Predicted Secondary structure
Template SS confidence
		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.								220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
Predicted Secondary structure																															.	.	.	.	.	.	.
Query SS confidence																															.	.	.	.	.	.	.
Query Sequence		T	G	V	Q	T	P	E	W	K	P	R	L	V	W	S	C	L	G	L	Y	I	V	F	L	T	A	L	E	F	.	.	.	.	.	.	.	K	Q	E	L	W	G	L	V	I	V	A	A	G	F	A	L	L	A	R	R	V	V	L	S	V	D	W	T	L	L	L	V	F	M	A	M	F	I	D	V	H	L	L	T
Query Conservation																															.	.	.	.	.	.	.
Alig confidence																															.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	I	E	G	H	L	E	G	K	L	P	L	V	W	Q	R	V	L	P	I	K	L	V	G	G	F	L	S	L	G	A	G	M	L	A	G	F	E	G	P	T	I	Q	M	G	G	S	I	G	Q	M	T	G	G	W	F	K	A	T	Q	E	N	Q	R	I	L	I	A	V	G	A	G	A	G	L	A	T	A	F	N
Template Known Secondary structure							T	T	S	S	S																					T	T		S			T																			T	T																							T
Template Predicted Secondary structure
Template SS confidence
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions