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Job DescriptionP75788
Confidence0.50%DateThu Jan 5 12:14:09 GMT 2012
Rank68Aligned Residues157
% Identity8%Templatec3llqB_
PDB info PDB header:membrane proteinChain: B: PDB Molecule:aquaporin z 2; PDBTitle: aquaporin structure from plant pathogen agrobacterium tumerfaciens
Resolution2.01 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  LVGIGLSFFVPFAPKSWPAAIDWHTIITLSGLMLLTKGVEL. . SGYFDVLGRKMVRRFATERRLAMFMVLAAALLSTFLT
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Template Sequence  AVSVGLTVAGRFPASSLVPYVIAQVAGAIVAAAALYVIATGKAGIDLGGFASNGYGEHSPGGYSLVSALLIEI. . . . . . .
Template Known Secondary structure  TTSS
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   65....70.........80.........90.........100.........110.........120.........130.......
 
   98.100.........110.........120.........130.........140.........150. ........160.........170...
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Query Sequence  NDVALFIVVPLTITLKRLCEIPVNRLIIFEALAVNAGSLLTPIGNPQNILIWGR. . . . SGLSFAGFIAQMAPLAGAMMLT
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Template Sequence  . ILTAFFLIVILGSTHGRVPAGFAPIAIGLALTLIHLISIPVTNTSVNPARSTGQALFVGGWALQQLWLFWLAPIVGGAA
Template Known Secondary structure  .TSTTS
TT
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   138.140.........150.........160.........170.........180.........190.........200.........210......
 
   174.....180....
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Query Sequence  LLLLCWCCFPG
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Template Sequence  GAVIWKLFGEK
Template Known Secondary structure  T

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   217..220.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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