Job Description P75788 Confidence 0.48% Date Thu Jan 5 12:14:09 GMT 2012 Rank 71 Aligned Residues 159 % Identity 11% Template c3klzE_ PDB info PDB header:membrane protein Chain: E: PDB Molecule:putative formate transporter 1; PDBTitle: pentameric formate channel with formate bound Resolution 2.50 Å

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		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.					.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure																																								.	.	.	.
Query SS confidence																																								.	.	.	.
Query Sequence		S	F	F	V	P	F	A	P	K	S	W	P	A	A	I	D	W	H	T	I	I	T	L	S	G	L	M	L	L	T	K	G	V	E	L	S	G	Y	.	.	.	.	F	D	V	L	G	R	K	M	V	R	R	F	A	T	E	R	R	L	A	M	F	M	V	L	A	A	A	L	L	S	T	F	L	T	N	D	V	A
Query Conservation																																								.	.	.	.
Alig confidence																																								.	.	.	.
Template Conservation
Template Sequence		K	A	S	G	K	I	S	W	K	E	L	V	R	N	W	T	V	V	Y	F	G	N	L	C	G	S	I	I	L	V	F	I	M	L	A	T	R	Q	F	M	E	D	G	G	Q	L	G	L	N	A	M	A	I	S	Q	H	K	L	H	H	T	F	L	Q	A	F	A	L	G	L	M	C	N	I	L	V	C	L	A	V
Template Known Secondary structure					T	S	S																															T	G	G	G	T	G	G	G												T	T	S
Template Predicted Secondary structure
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
															102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	L	F	I	V	V	P	L	T	I	T	L	K	R	L	C	E	I	P	V	N	R	L	I	I	F	E	A	L	A	V	N	A	G	S	L	L	T	P	I	G	N	P	Q	N	I	L	I	W	G	R	S	G	L	S	F	A	G	F	I	A	Q	M	A	P	L	A	G
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		W	M	T	F	S	A	R	S	L	T	D	K	V	M	V	L	I	L	P	V	A	M	F	V	S	S	G	F	E	H	C	I	A	N	M	F	Q	V	P	M	A	I	G	I	K	Y	F	A	P	E	S	F	W	A	M	T	G	A	N	I	A	Q	Y	A	D	L	N	F	V	N	F	I	V	N	N	L	I	P	V	T
Template Known Secondary structure					T	T		S	S																		T	T																														T			G	G	G	G	T	T		S								T
Template Predicted Secondary structure
Template SS confidence
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
		169	170	.	.	.						.	.	.	.	.	.	180	.	.	.	.
Predicted Secondary structure							.	.	.	.	.
Query SS confidence							.	.	.	.	.
Query Sequence		A	M	M	L	T	.	.	.	.	.	L	L	L	L	C	W	C	C	F	P	G
Query Conservation							.	.	.	.	.
Alig confidence							.	.	.	.	.
Template Conservation
Template Sequence		L	G	N	I	V	G	G	G	V	F	V	G	M	W	Y	W	L	I	Y	L	K
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions