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Job DescriptionP75788
Confidence1.65%DateThu Jan 5 12:14:09 GMT 2012
Rank11Aligned Residues126
% Identity8%Templatec3dh4A_
PDB info PDB header:transport proteinChain: A: PDB Molecule:sodium/glucose cotransporter; PDBTitle: crystal structure of sodium/sugar symporter with bound galactose from2 vibrio parahaemolyticus
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  ITLKRLCEIPVNRLIIFEALAVNAGSLLTPIGNPQNILIWGRSGLSFAGFIAQMAPLAGAMMLTLLLLCWCCFPGKAMQY
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Template Sequence  XXXXXXAGKSLPWWAVGASLIAANISAEQFIGMSGSGYSIGLA. . . . . . IASYEWMSAITLIIVGKYFLPIFIEKGIYTI
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S



STT
GG......GTTT

S
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   190.........200.........210.........220.........230.........240.
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Query Sequence  HTGVQTPEWKPRLVWSCLGLYIVFLTALEFKQELWGLVIVAAGFALLARRVV
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Template Sequence  PEFVEKRFNKKLKTILAVFWISLYIFVNLTSVLYLGGLALETILGIPLMYSI
Template Known Secondary structure  T
TTT

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   115....120.........130.........140.........150.........160......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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