 |
Job Description | P0AA25 | Confidence | 97.95% | Date | Thu Jan 5 11:11:46 GMT 2012 |
Rank | 201 | Aligned Residues | 90 |
% Identity | 20% | Template | d2h01a1 |
SCOP info | Thioredoxin fold
| Thioredoxin-like
| Glutathione peroxidase-like
|
Resolution | 2.30 |
|
 |
  |   |
18 | . | 20 | . | . | . | . | . | . | . | . | . | |
30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | |
. | . | . | . | . | . | . | 60 | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . |
Predicted Secondary structure |   |
 |  |
|
|
|
|  |  |  |  |  |  | . |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . |
|  |  |  |  |  |  |  |
|  |  |  |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
Query Sequence |   |
L | K | A | D | G | A | I | L | V | D | F | W | . |
A | E | W | C | G | P | C | K | M | I | A | P | I | L | D | E | I | A | D | E | Y | Q | G | . |
K | L | T | V | A | K | L | N | I | D | Q | N | P | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
G | T |
Query Conservation |   |
  |   |   |   |
|   |
|   |
|   |
|   | . |
|   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
Template Conservation |   |
  |   |
|
|   |   |
|
|
|   |
|   |   |   |   |   |
|   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |
|
Template Sequence |   |
F | I | G | K | K | Y | V | L | L | Y | F | Y | P | L | D | F | T | F | V | C | P | S | E | I | I | A | L | D | K | A | L | D | S | F | K | E | R | N | V | E | L | L | G | C | S | V | D | S | K | F | T | H | L | A | W | K | K | T | P | L | S | Q | G | G | I | G | N | I | K | H | T | L | I | S | D | I | S | K | S | I |
Template Known Secondary structure |   |
G | T | T | T |
|  |  |  |  |  |  |
| S |
| S | S |
| S | S |
|
|  |  |  |  |  |  |  |  | T |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  | S | S |
|  |  |  |  |  |  |  |  | T | S |
| G | G | G | T |
|
|
| S |
| S | S |  |  |  |  |
| T | T | S |  |  |
Template Predicted Secondary structure |   |
 |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
25 | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . |
  |
  |   |
68 | . | 70 | . | . | . | . | . | |
|
|
|
|
. | . | . | . | 80 | . | . | |
. | . | . | . | . | . | . | 90 | . | . | . | |
|
|
|
. | . | . | . | . | . | 100 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|  |  |  |  |  | . |
|
|
|  |  |  |  |  |  |  |
| . | . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | P | K | Y | G | I | R | G | . |
. |
. |
. |
. |
I | P | T | L | L | L | F | . |
K | N | G | E | V | A | A | T | K | V | G | . |
. |
. |
. |
A | L | S | K | G | Q | L | K | E | F | L | D | A | N |
Query Conservation |   |
  |   |   |   |   |
|   |   | . | . | . | . | . |   |
|
|   |   |   |
| . |   |   |
|   |   |   |   |   |   |   |
| . | . | . | . |   |   |   |   |   |   |
|   |   |   |
|   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|
|
|   |   |   |   |   |   |   |   |
|   |   |
|
|
|
|   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |
|   |
|
|
Template Sequence |   |
A | R | S | Y | D | V | L | F | N | E | S | V | A | L | R | A | F | V | L | I | D | K | Q | G | V | V | Q | H | L | L | V | N | N | L | A | L | G | R | S | V | D | E | I | L | R | L | I | D | A | L |
Template Known Secondary structure |   |
 |  |  | T | T |
|  |  | T | T | T |  |  |
|
|  |  |  |  |  |
| T | T | S |
|  |  |  |  |  |  | G | G | G | S | S | G | G | G |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
105 | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|