 |
Job Description | P0AA25 | Confidence | 99.81% | Date | Thu Jan 5 11:11:46 GMT 2012 |
Rank | 88 | Aligned Residues | 104 |
% Identity | 28% | Template | d2djja1 |
SCOP info | Thioredoxin fold
| Thioredoxin-like
| PDI-like
|
Resolution | UNK |
|
 |
  |   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | |
|
|
|
|
. | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
| . | . | . | . | . |  |  |  |  |  |  |  |
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | K | I | I | H | L | T | D | D | S | F | D | T | D | V | L | K | A | D | G | A | I | L | V | D | F | W | A | E | W | C | G | P | C | K | M | I | A | P | I | L | D | E | I | A | D | E | Y | Q | G | K | . |
. |
. |
. |
. |
L | T | V | A | K | L | N | I | D | Q | N | P | G | T | A | P | K | Y | G | I | R | G | I | P |
Query Conservation |   |
  |   |
|   |   |
|
|   |   |   |
|   |   |   |
|   |   |   |   |
|   |
|   |
|   |
|   |
|   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |
|
|   |   |   |
|   |   |   |
|   |   |   |   |
|   |   |
|
|   |
|
|
|   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |   |   |   | . | . | . |   |   |   |   |   |   |   |   |   |
|
Template Sequence |   |
G | P | V | T | V | V | V | A | K | N | Y | N | E | I | V | L | D | D | T | K | D | V | L | I | E | F | Y | A | P | W | C | G | H | C | K | A | L | A | P | K | Y | E | E | L | G | A | L | Y | A | K | S | E | F | K | D | R | V | V | I | A | K | V | D | A | T | A | N | . |
. |
. |
D | V | P | D | E | I | Q | G | F | P |
Template Known Secondary structure |   |
| S | S |  |  |
|
| T | T | T | T | T | T | S | S | S |
| T | T | S |
|  |  |  |  |  |  |
| S | S |
| T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S | S |
| T | T | S | S |  |  |  |  |  |  | T | T | T | S | . | . | . |
|
| S | S |
|
| S | S | S | S |
Template Predicted Secondary structure |   |
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  | . | . | . |  |  |  |
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
7 | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | |
|
|
. | . | . | . | . | . | 80 | . | . | . |
  |
  |   |
78 | . | 80 | . | . | . | . | . | . | |
|
. | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|  | . | . |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | L | L | L | F | K | N | G | E | . |
. |
V | A | A | T | K | V | G | A | L | S | K | G | Q | L | K | E | F | L | D | A | N | L | A |
Query Conservation |   |
|   |   |   |
|   |   |
|   | . | . |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |
|   |
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |
|   |   |
|
|   |   |   |   |   |
Template Sequence |   |
T | I | K | L | Y | P | A | G | A | K | G | Q | P | V | T | Y | S | G | S | R | T | V | E | D | L | I | K | F | I | A | E | N | G | K |
Template Known Secondary structure |   |
 |  |  |  |  |
| S | S |
| T | T | S |
|
|
|
|
|
|
| S |
|  |  |  |  |  |  |  |  |  |  | T | S | S |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
84 | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|