 |
Job Description | P0AA25 | Confidence | 97.16% | Date | Thu Jan 5 11:11:46 GMT 2012 |
Rank | 244 | Aligned Residues | 74 |
% Identity | 16% | Template | c2jacA_ |
PDB info |
PDB header:electron transport | Chain: A: PDB Molecule:glutaredoxin-1; |
PDBTitle: glutaredoxin grx1p c30s mutant from yeast
|
Resolution | 2.02 Å |
|
 |
  |   |
11 | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | |
|
|
|
|
. | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|  |  |  | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | S | F | D | T | D | V | L | K | A | D | G | A | I | L | V | D | F | W | A | E | W | C | G | P | C | K | M | I | A | P | I | L | D | E | I | A | D | E | Y | Q | G | K | L | T | V | A | K | L | N | I | D | Q | N | . |
. |
. |
. |
. |
P | G | T | A | P | K | Y | G | I | R | G | I | P | T | L | L | L | F | K | N | G |
Query Conservation |   |
  |   |
|   |   |   |
|   |   |   |   |
|   |
|   |
|   |
|   |
|   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . |   |   |   |   |   |   |   |   |
|   |   |   |
|
|   |   |   |
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
Template Conservation |   |
  |   |
|   |   |   |
|   |   |   |   | . | . | . |
|
|
|
|
|   |   |   |
|
|   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |
|
|
|   |
| . | . |
|
|   |
|
Template Sequence |   |
K | H | V | K | D | L | I | A | E | N | E | . |
. |
. |
I | F | V | A | S | K | T | Y | C | P | Y | S | H | A | A | L | N | T | L | F | E | K | L | K | V | P | R | S | K | V | L | V | L | Q | L | N | D | M | K | E | G | A | D | I | Q | A | A | L | Y | E | I | N | G | Q | R | T | V | P | N | I | . |
. |
Y | I | N | G |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  | T | S | S | . | . | . |  |  |  |  |  |
| T | T |
|  |  |  |  |  |  |  |  |  |  |  | T | T | S |
|
|
| G | G | G |  |  |  |  |  | G | G | G | S | T | T |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| S | S |
|  |  | . | . |  |  | T | T |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
| . | . | . |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  | . | . |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
8 | . | 10 | . | . | . | . | . | . | . | . | |
|
|
. | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | |
|
. | 80 | . | . |
  |
  |   |
86 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |
Query SS confidence |   |
|
|
|
|
Query Sequence |   |
E | V | A | A |
Query Conservation |   |
  |   |   |   |
Alig confidence |   |
|
|
|
|
Template Conservation |   |
  |   |
|
|
Template Sequence |   |
K | H | I | G |
Template Known Secondary structure |   |
 |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |
|
Template SS confidence |   |
|
|
|
|
  |   |
83 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|