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3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | |
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. | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 |
Predicted Secondary structure |   |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |
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Query SS confidence |   |
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Query Sequence |   |
R | I | A | F | V | F | S | T | A | P | H | G | T | A | A | G | R | E | G | L | D | A | L | L | A | T | S | A | . |
. |
L | T | D | D | L | A | V | F | F | I | A | D | G | V | F | Q | L | L | P | G | Q | K | P | D | A | V | L | A | R | D | Y | I | A | T | F | K | L | L | G | L | Y | D | I | E | Q | C | W | V | C | A |
Query Conservation |   |
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|   |   |   |   |   |   |   |
|   |
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| . | . |   |   |   |   |
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|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
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|   |
Alig confidence |   |
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| . | . |
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| . | . | . | . | . | . | . | . |
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| . |
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Template Conservation |   |
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|   |   |   | . | . |
|   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |
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|   |   |
|   |   |
|   |   |
|   |   |   | . | . | . | . | . | . | . | . |   |   |   |   |   |   |
|   |   |
|   |   |   |
|
| . |   |   |   |   |
|   |
Template Sequence |   |
R | V | V | F | H | I | D | E | D | . |
. |
D | E | S | R | V | L | L | L | I | S | N | V | R | N | L | X | A | D | L | E | S | V | R | I | E | V | V | A | Y | S | X | G | V | N | V | L | R | R | D | . |
. |
. |
. |
. |
. |
. |
. |
S | E | Y | S | G | D | V | S | E | L | T | G | Q | G | V | . |
R | F | C | A | C | S |
Template Known Secondary structure |   |
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| . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| S | S |  |  |  |  |  |  |  |
| G | G | G | G | G | G | G | B | T | T | . | . | . | . | . | . | . | . |
| T | T |  |  |  |  |  |  |  |  |  | T | T |
| . |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
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| . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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| . | . | . | . | . | . | . | . |
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|  |  |  |  |  |  |  |  |  |  |
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| . |  |  |  |  |  |  |
Template SS confidence |   |
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  |   |
5 | . | . | . | . | 10 | . | . | . | |
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. | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | |
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. | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | |
. | . | 70 | . | . | . |
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  |   |
81 | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | |
|
. | . | . | . | . | 110 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
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|  |  |
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|  |  | . | . |  |  |  |  |  |  |  |  |
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Query SS confidence |   |
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| . |
. |
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Query Sequence |   |
A | S | L | R | E | R | G | L | D | P | Q | T | P | F | V | V | E | A | T | P | L | E | A | D | . |
. |
A | L | R | R | E | L | A | N | Y | D | V | I | L | R |
Query Conservation |   |
  |
|
|   |   |
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|   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |   | . | . |   |
|   |   |
|
|   |   |   |
|   |
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|   |
Alig confidence |   |
|
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| . |
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| . | . |
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Template Conservation |   |
  |
|
|   |   |   |   |
|   |   |   | . |   |
|   |   |   |
|   |   |
|   |   |
|   |   |   |
|   |   |
|
|   |   |
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|   |
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|
Template Sequence |   |
N | T | L | R | A | S | G | X | D | G | D | . |
D | L | L | E | G | V | D | V | V | S | S | G | V | G | H | I | V | R | R | Q | T | E | G | W | A | Y | I | R |
Template Known Secondary structure |   |
 |  |  |  |  | T | T |
|
| G | G | . | G | B |
| T | T |
|  |  |  | S |
|  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
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|  |  | . |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |
|
Template SS confidence |   |
|
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  |   |
74 | . | . | . | . | . | 80 | . | . | . | . | |
. | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . |
  |