Return to main results Retrieve Phyre Job Id

Job DescriptionP75822
Confidence99.97%DateThu Jan 5 12:14:36 GMT 2012
Rank59Aligned Residues277
% Identity17%Templated1bxka_
SCOP infoNAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains Tyrosine-dependent oxidoreductases
Resolution1.90

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40..... ....50.........60...... ...70...
Predicted Secondary structure 














.......








..

Query SS confidence 










































. . . . . . .




















. .






Query Sequence  QRILVLGASGYIGQHLVRTLSQQGHQILAAARHVDRLAKLQLA. . . . . . . NVSCHKVDLSWPDNLPALLQD. . IDTVYFL
Query Conservation 
 







 

  

  

  
  
 

 
           ....... 

 
  

 
   
  

 
..

 

 
Alig confidence 










































.......




















..






Template Conservation 
 










  

  

  
  
    
                   
  
  

 
                   
Template Sequence  RKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICDRAELARVFTEHQPDCVMHL
Template Known Secondary structure 
TTTS
S




TT

GGGTTTTTTSTT


TT


S
Template Predicted Secondary structure 




























Template SS confidence 















































































   2.......10.........20.........30.........40.........50.........60.........70.........80.
 
   74. ....80.........90.........100....... ..110.........120.
Predicted Secondary structure 

......







.........










.................
Query SS confidence 

. . . . . .































. . . . . . . . .













. . . . . . . . . . . . . . . . .
Query Sequence  VH. . . . . . SMGEGGDFIAQERQVALNVRDALREVPVKQLI. . . . . . . . . FLSSLQAPPHEQSD. . . . . . . . . . . . . . . . .
Query Conservation 
 ......               
  
  

    
 
 
.........  

        
 .................
Alig confidence 

......































.........













.................
Template Conservation 
                         
                        
                            
Template Sequence  AAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYS
Template Known Secondary structure 








SSS

TTS

GGGG



SSS

B
TTS




S
Template Predicted Secondary structure 



















































Template SS confidence 















































































   82.......90.........100.........110.........120.........130.........140.........150.........160.
 
   122.......130.........140.........150.. .......160.........170.........180.........190......
Predicted Secondary structure  ..







...














Query SS confidence  . .






























. . .











































Query Sequence  . . HLRARQATADILREANVPVTELRAGIIVGAG. . . SAAFEVMRDMVYNLPVLTPPRWVRSRTTPIALENLLHYLVALLD
Query Conservation  ..
  

   
  
   

  



   
 
  ...         
         
         
 
 


  
  

 
Alig confidence  ..






























...











































Template Conservation                                                                     
 
 
        
Template Sequence  ASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYHFPEKLIPLMILNALAGKSLPVYGNGQQIRDWLYVEDHARALYCVAT
Template Known Secondary structure 



STT

TTSTT



TTS


Template Predicted Secondary structure 







































Template SS confidence 















































































   162.......170.........180.........190.........200.........210.........220.........230.........240.
 
   197..200.........210.........220.........230.........240.........250.........260.........270......
Predicted Secondary structure 































Query SS confidence 















































































Query Sequence  HPASEHRIFEAAGPEVLSYQQQFEHFMAVSGKRRWLIPIPLPTRWISVWFLNVITSVPPTTARALIQGLKHDLLADDTAL
Query Conservation   
   
    
 


 

  

    
   
     
 

     

   
  
  

   
  

  
    
     
Alig confidence 



.







































.....................













Template Conservation      .     
              
                   .....................         
  

Template Sequence  TGKV. GETYNIGGHNERKNLDVVETICELLEELAPNKPHGVAHYR. . . . . . . . . . . . . . . . . . . . . DLITFRYAIDASKI
Template Known Secondary structure 

T.T


S



S

TT
S
GG.....................GG

B
B

Template Predicted Secondary structure 



.

















.....................





Template SS confidence 















































































   242... ....250.........260.........270.........280..... ....290.........
 
   277. .280.........290.........300.
Predicted Secondary structure  .








Query SS confidence 

.






















Query Sequence  RA. LIPQRLIAFDDAVRSTLKEEEKL
Query Conservation    .
    
     

  

      
Alig confidence 

.






















Template Conservation     

  
     
 
     
    
Template Sequence  ARELGCVPQETFESGMRKTVQWYLAN
Template Known Secondary structure  T







Template Predicted Secondary structure 







Template SS confidence 

























   309310.........320.........330....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions