|   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | |
|
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|
. | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | |
|
|
|
|
|
|
. | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |
| . | . | . | . | . | . |
|
|
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|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
| . | . | . | . | . | . | . |
|
|
|  |
Query SS confidence |   |
|
|
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|
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|
|
|
|
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|
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|
| . |
. |
. |
. |
. |
. |
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|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
Query Sequence |   |
Q | R | I | L | V | L | G | A | S | G | Y | I | G | Q | H | L | V | R | T | L | S | Q | Q | G | H | Q | I | L | A | A | A | R | H | V | D | R | L | A | K | . |
. |
. |
. |
. |
. |
L | Q | L | A | N | V | S | C | H | K | V | D | L | S | W | P | D | N | L | P | A | L | L | Q | . |
. |
. |
. |
. |
. |
. |
D | I | D | T |
Query Conservation |   |
|   |
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|   |
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|   |   |
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|   |   |
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|   |   |
|   |   |
|   |
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|   |
|   |   |   |   |   |   |   | . | . | . | . | . | . |   |   |   |   |   |
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|   |
|   |   |
|
|   |
|   |   |   |
|   |   |
|
|   | . | . | . | . | . | . | . |
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|   |
Alig confidence |   |
|
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| . | . | . | . | . | . |
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| . | . | . | . | . | . | . |
|
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|
Template Conservation |   |
|   |
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|
|   |
|
|
|   |   |   |
|   |   |
|   |   |   |
|
|   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
T | T | A | L | V | T | G | G | S | K | G | I | G | Y | A | I | V | E | E | L | A | G | L | G | A | R | V | Y | T | C | S | R | N | E | K | E | L | D | E | C | L | E | I | W | R | E | K | G | L | N | V | E | G | S | V | C | D | L | L | S | R | T | E | R | D | K | L | M | Q | T | V | A | H | V | F | D | G | K | L | N |
Template Known Secondary structure |   |
|  |  |  |  |  | S |
| S | S |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |
|
| T | T |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S |
|
|
|
Template Predicted Secondary structure |   |
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
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|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
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|
Template SS confidence |   |
|
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  |   |
22 | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . |
  |
  |   |
70 | . | . | . | . | . | . | . | . | . | 80 | |
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. | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | |
|
. | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . |
Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|
|  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
| . | . |
|
|
|
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|
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|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
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| . |
. |
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Query Sequence |   |
V | Y | F | L | V | H | S | M | G | E | G | . |
. |
. |
. |
. |
. |
. |
. |
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. |
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. |
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. |
G | D | F | I | A | Q | E | R | Q | V | A | L | N | V | R | D | A | L | R | E | V | P | V | K | Q | L | I | F | L | S | S | . |
. |
L | Q | A | P | P | H | E | Q | S | D | H | L | R | A | R | Q | A | T | A | D | I |
Query Conservation |   |
|
|   |
|
|   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |
|
|   |   |   |   |
|   |
|   |
|   |   |
|
| . | . |   |   |   |   |   |   |   |   |
|   |
|   |   |
|
|   |   |   |
|   |   |
Alig confidence |   |
|
|
|
|
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|
|
|
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|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
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| . | . |
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|
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|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |
|   |   |   |   |
Template Sequence |   |
I | L | V | N | N | A | G | V | V | I | H | K | E | A | K | D | F | T | E | K | D | Y | N | I | I | M | G | T | N | F | E | A | A | Y | H | L | S | Q | I | A | Y | P | L | L | K | A | S | Q | N | G | N | V | I | F | L | S | S | I | A | G | F | S | A | L | P | S | V | S | L | Y | S | A | S | K | G | A | I | N | Q | M |
Template Known Secondary structure |   |
 |  |  |  |
|
|
|
|
|
|
|
|
| T | T | T |
|
|  |  |  |  |  |  |  |  |  |  |  | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | S |  |  |  |  |  |  |
|
| G | G | G | T | S |
|
| T | T |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
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|
|  |  |  |  |  |  |  |  |  |  |  |
|
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|
|
|  |  |  |  |
|
|
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|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
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|
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|
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|
  |   |
102 | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . |
  |
  |   |
133 | . | |
|
|
|
|
|
|
. | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | |
|
. | . |
Predicted Secondary structure |   |
 |  | . | . | . | . | . | . | . |  |  |
|
|
|  |  |  |  |  |
|
|  |  |  |
|
|
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|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|
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|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
| . | . |
|
|
Query SS confidence |   |
|
| . |
. |
. |
. |
. |
. |
. |
|
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| . |
. |
|
|
Query Sequence |   |
L | R | . |
. |
. |
. |
. |
. |
. |
E | A | N | V | P | V | T | E | L | R | A | G | I | I | V | G | A | G | S | A | A | F | E | V | M | R | D | M | V | Y | N | L | P | V | L | T | P | P | R | W | V | R | S | R | T | T | P | I | A | L | E | N | L | L | H | Y | L | V | A | L | L | D | H | P | A | S | E | . |
. |
H | R |
Query Conservation |   |
|   | . | . | . | . | . | . | . |   |   |
|
|   |   |
|
|
|
|   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |
|   |
|
|
|   |   |
|   |   |
|
|   |   |
|   |   |   | . | . |
|   |
Alig confidence |   |
|
| . | . | . | . | . | . | . |
|
|
|
|
|
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|
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|
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| . | . | . | . | . |
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| . | . | . | . | . | . | . | . | . | . |
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|
| . | . |
|
|
Template Conservation |   |
  |   |   |   |
|   |
|   |   |   |   |   |
|   |
|
|   |
|   |
|
|   |
|   |
|   | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |
|   |   | . | . | . | . | . | . | . | . | . | . |
|   |   |   |
|
|
|
|
|   |   |   |   |   |
|   |
|   |   |   |   |   |
|
|
|   |
Template Sequence |   |
T | K | S | L | A | C | E | W | A | K | D | N | I | R | V | N | S | V | A | P | G | V | I | L | Q | K | . |
. |
. |
. |
. |
E | E | I | D | N | F | I | V | K | T | P | M | G | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
R | A | G | K | P | Q | E | V | S | A | L | I | A | F | L | C | F | P | A | A | S | Y | I | T | G | Q |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  | G | G | G | T |  |  |  |  |  |  |  |  |
| S | B |
|
|  | . | . | . | . | . |  |  |  |  |  |  |  |  |  | S | T | T |
| . | . | . | . | . | . | . | . | . | . | S |
| B |
|  |  |  |  |  |  |  |  |  |  |  |  | S | G | G | G | T | T |
|
| S |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  | . | . | . | . | . |  |  |  |  |  |  |  |  |
|
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|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|  |  |  |
|
|
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|
|
Template SS confidence |   |
|
|
|
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|
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|
  |   |
182 | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | |
|
|
|
|
. | . | 210 | . | . | . | . | . | . | . | . | . | 220 | |
|
|
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|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . |
  |
  |   |
204 | . | . | . | . | . | 210 |
Predicted Secondary structure |   |
 |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
Query Sequence |   |
I | F | E | A | A | G | P |
Query Conservation |   |
  |   |   |
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |
|
|
|
|
Template Sequence |   |
I | I | W | A | D | G | G |
Template Known Secondary structure |   |
 |  |  |  | S | T | T |
Template Predicted Secondary structure |   |
 |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
  |   |
260 | . | . | . | . | . | . |
  |