Return to main results Retrieve Phyre Job Id

Job DescriptionP75822
Confidence99.35%DateThu Jan 5 12:14:36 GMT 2012
Rank117Aligned Residues204
% Identity18%Templatec3toxG_
PDB info PDB header:oxidoreductaseChain: G: PDB Molecule:short chain dehydrogenase; PDBTitle: crystal structure of a short chain dehydrogenase in complex with2 nad(p) from sinorhizobium meliloti 1021
Resolution1.93 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1. .......10.........20.........30.........40 .........50.........60..... .
Predicted Secondary structure 

.









......












.......
Query SS confidence 

.





































. . . . . .
























. . . . . . .
Query Sequence  MP. QRILVLGASGYIGQHLVRTLSQQGHQILAAARHVDRLA. . . . . . KLQLANVSCHKVDLSWPDNLPALLQ. . . . . . . D
Query Conservation 
 .
 







 

  

  

  
  
 

 
      ......      

 
  

 
   
  

 .......
Alig confidence 

.





































......
























.......
Template Conservation 
 

 






 


 


  
   
  


  
           
            
                    
Template Sequence  LEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRFGG
Template Known Secondary structure  TTT
SSTTSTT
S
TTT



TT
SS
Template Predicted Secondary structure 



































Template SS confidence 















































































   6...10.........20.........30.........40.........50.........60.........70.........80.....
 
   67..70.........80 .........90.........100.........110.... .....120........
Predicted Secondary structure 







...............








...





Query SS confidence 













. . . . . . . . . . . . . . .

































. . .













Query Sequence  IDTVYFLVHSMGEG. . . . . . . . . . . . . . . GDFIAQERQVALNVRDALREVPVKQLIFLSSLQA. . . PPHEQSDHLRARQA
Query Conservation 

 

 

      ...............          
  
  

    
 
 
  

   ...     
 
  

  
Alig confidence 













...............

































...













Template Conservation                                                         
                 
  

  
Template Sequence  LDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHTAGFAGVAPYAASKAG
Template Known Secondary structure 







S
S
GGG

TT


SBTTTB

TT
Template Predicted Secondary structure 




















































Template SS confidence 















































































   86...90.........100.........110.........120.........130.........140.........150.........160.....
 
   129130..... ....140........ .150.........160.........170.........180.........190..... .
Predicted Secondary structure  .......




...

















..
Query SS confidence 






. . . . . . .












. . .














































. .
Query Sequence  TADILRE. . . . . . . ANVPVTELRAGII. . . VGAGSAAFEVMRDMVYNLPVLTPPRWVRSRTTPIALENLLHYLVALL. . D
Query Conservation   
  
  ....... 

  



   
... 
           
         
         
 
 


  
  

.. 
Alig confidence 






.......












...



















..........
















..
Template Conservation          
 
     
 

 
 

 
 
                   

.......... 
   
 


  
 

 
  
Template Sequence  LIGLVQALAVELGARGIRVNALLPGGTDTPANFANLAPETRGFVEGLHAL. . . . . . . . . . KRIARPEEIAEAALYLASDG
Template Known Secondary structure  TTT
SBSSTTSGGG

TTTSTT..........SS
B
SGG
Template Predicted Secondary structure 





































..........





Template SS confidence 















































































   166...170.........180.........190.........200.........210..... ....220.........230.....
 
   197..200.........210....
Predicted Secondary structure 












Query SS confidence 

















Query Sequence  HPASEHRIFEAAGPEVLS
Query Conservation   
   
    
 


 

Alig confidence 

















Template Conservation 
  


  
 



  
 
Template Sequence  ASFVTGAALLADGGASVT
Template Known Secondary structure  GTT

S
STTGGG
Template Predicted Secondary structure 












Template SS confidence 

















   239240.........250......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions