Job Description P75822 Confidence 99.14% Date Thu Jan 5 12:14:36 GMT 2012 Rank 211 Aligned Residues 200 % Identity 16% Template c3rkuC_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:oxidoreductase ymr226c; PDBTitle: substrate fingerprint and the structure of nadp+ dependent serine2 dehydrogenase from saccharomyces cerevisiae complexed with nadp+ Resolution 2.60 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.				.	.	.	30	.	.	.	.	.	.	.	.	.	40	.									.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.																.	.	.	.	.	.	.	.																											.	.	.	.
Query SS confidence																										.	.	.																.	.	.	.	.	.	.	.																											.	.	.	.
Query Sequence		Q	R	I	L	V	L	G	A	S	G	Y	I	G	Q	H	L	V	R	T	L	S	Q	Q	G	.	.	.	H	Q	I	L	A	A	A	R	H	V	D	R	L	A	K	.	.	.	.	.	.	.	.	L	Q	L	A	N	V	S	C	H	K	V	D	L	S	W	P	D	N	L	P	A	L	L	Q	D	I	.	.	.	.
Query Conservation																										.	.	.																.	.	.	.	.	.	.	.																											.	.	.	.
Alig confidence																										.	.	.																.	.	.	.	.	.	.	.																											.	.	.	.
Template Conservation
Template Sequence		K	T	V	L	I	T	G	A	S	A	G	I	G	K	A	T	A	L	E	Y	L	E	A	S	N	G	D	M	K	L	I	L	A	A	R	R	L	E	K	L	E	E	L	K	K	T	I	D	Q	E	F	P	N	A	K	V	H	V	A	Q	L	D	I	T	Q	A	E	K	I	K	P	F	I	E	N	L	P	Q	E	F
Template Known Secondary structure								S	T	T	S													T	T	T	T									S																	T	T										T	T											T	S		G	G	G
Template Predicted Secondary structure
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
					68	.	70	.	.	.	.	.	.	.	.	.	80																.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120			.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																									.	.
Query SS confidence		.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																									.	.
Query Sequence		.	.	.	D	T	V	Y	F	L	V	H	S	M	G	E	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	D	F	I	A	Q	E	R	Q	V	A	L	N	V	R	D	A	L	R	E	V	P	V	K	Q	L	I	F	L	S	S	L	Q	A	P	P	H	E	Q	S	.	.	D	H	L	R	A	R	Q
Query Conservation		.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																									.	.
Alig confidence		.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																									.	.
Template Conservation
Template Sequence		K	D	I	D	I	L	V	N	N	A	G	K	A	L	G	S	D	R	V	G	Q	I	A	T	E	D	I	Q	D	V	F	D	T	N	V	T	A	L	I	N	I	T	Q	A	V	L	P	I	F	Q	A	K	N	S	G	D	I	V	N	L	G	S	I	A	G	R	D	A	Y	P	T	G	S	I	Y	C	A	S	K	F
Template Known Secondary structure			S																	T	T	S														T																		T										G	G	G	T	S			T	T
Template Predicted Secondary structure
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
		128	.	130	.	.	.	.	.	.								.	.	.	140	.	.	.	.	.	.	.	.	.	150	.						.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.																.	.	.	.	.
Query SS confidence											.	.	.	.	.	.	.																.	.	.	.	.
Query Sequence		A	T	A	D	I	L	R	E	A	.	.	.	.	.	.	.	N	V	P	V	T	E	L	R	A	G	I	I	V	G	A	.	.	.	.	.	G	S	A	A	F	E	V	M	R	D	M	V	Y	N	L	P	V	L	T	P	P	R	W	V	R	S	R	T	T	P	I	A	L	E	N	L	L	H	Y	L	V	A	L	L
Query Conservation											.	.	.	.	.	.	.																.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.																.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																						.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	V	G	A	F	T	D	S	L	R	K	E	L	I	N	T	K	I	R	V	I	L	I	A	P	G	L	V	E	T	E	F	S	L	V	R	Y	R	G	N	E	E	Q	A	K	N	V	Y	K	D	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	P	L	M	A	D	D	V	A	D	L	I	V	Y	A	T
Template Known Secondary structure														T	T	T	S	S									S				S	S						T	T	T										T	T	S		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																						.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.														.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		196	.	.	.			200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure						.	.
Query SS confidence						.	.
Query Sequence		D	H	P	A	.	.	S	E	H	R	I	F	E	A	A	G	P	E	V	L	S	Y
Query Conservation						.	.
Alig confidence						.	.
Template Conservation
Template Sequence		S	R	K	Q	N	T	V	I	A	D	T	L	I	F	P	T	N	Q	A	S	P	H
Template Known Secondary structure		T	S		T	T											T	T				T	T
Template Predicted Secondary structure
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions