Job Description P75822 Confidence 99.20% Date Thu Jan 5 12:14:36 GMT 2012 Rank 183 Aligned Residues 205 % Identity 16% Template c3r3sD_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:oxidoreductase; PDBTitle: structure of the ygha oxidoreductase from salmonella enterica Resolution 1.25 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40									.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.								.	.
Predicted Secondary structure																																								.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.
Query SS confidence																																								.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.
Query Sequence		Q	R	I	L	V	L	G	A	S	G	Y	I	G	Q	H	L	V	R	T	L	S	Q	Q	G	H	Q	I	L	A	A	A	R	H	V	D	R	L	A	.	.	.	.	.	.	.	.	K	L	Q	L	A	N	V	S	C	H	K	V	D	L	S	W	P	D	N	L	P	A	L	L	Q	.	.	.	.	.	.	.	D	I
Query Conservation																																								.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.
Alig confidence																																								.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	K	A	L	V	T	G	G	D	S	G	I	G	R	A	A	A	I	A	Y	A	R	E	G	A	D	V	A	I	N	Y	L	P	A	E	E	E	D	A	Q	Q	V	K	A	L	I	E	E	C	G	R	K	A	V	L	L	P	G	D	L	S	D	E	S	F	A	R	S	L	V	H	K	A	R	E	A	L	G	G	L
Template Known Secondary structure								T	T	T	S													T	T									G	G	G														T	T										T	T	S																T
Template Predicted Secondary structure
Template SS confidence
		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
		68	.	70	.	.	.	.	.	.	.	.	.	80														.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120			.	.	.	.	.	.	.	.	.	130	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.																																									.	.
Query SS confidence															.	.	.	.	.	.	.	.	.	.	.	.	.																																									.	.
Query Sequence		D	T	V	Y	F	L	V	H	S	M	G	E	G	.	.	.	.	.	.	.	.	.	.	.	.	.	G	D	F	I	A	Q	E	R	Q	V	A	L	N	V	R	D	A	L	R	E	V	P	V	K	Q	L	I	F	L	S	S	L	Q	A	P	P	H	E	Q	S	.	.	D	H	L	R	A	R	Q	A	T	A	D	I
Query Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.																																									.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.																																									.	.
Template Conservation
Template Sequence		D	I	L	A	L	V	A	G	K	Q	T	A	I	P	E	I	K	D	L	T	S	E	Q	F	Q	Q	T	F	A	V	N	V	F	A	L	F	W	I	T	Q	E	A	I	P	L	L	P	K	G	A	S	I	I	T	T	S	S	I	Q	A	Y	Q	P	S	P	H	L	L	D	Y	A	A	T	K	A	A	I	L	N	Y
Template Known Secondary structure															S	S	G	G	G														T											G	G	G			T	T									G	G	G	T	S			T	T
Template Predicted Secondary structure
Template SS confidence
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
		133	.	.	.								.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.			.	.	.	.	200	.	.	.
Predicted Secondary structure						.	.	.	.	.	.	.																																																												.	.
Query SS confidence						.	.	.	.	.	.	.																																																												.	.
Query Sequence		L	R	E	A	.	.	.	.	.	.	.	N	V	P	V	T	E	L	R	A	G	I	I	V	G	A	G	S	A	A	F	E	V	M	R	D	M	V	Y	N	L	P	V	L	T	P	P	R	W	V	R	S	R	T	T	P	I	A	L	E	N	L	L	H	Y	L	V	A	L	L	.	.	D	H	P	A	S	E	H	R
Query Conservation						.	.	.	.	.	.	.																																																												.	.
Alig confidence						.	.	.	.	.	.	.														.	.	.	.	.	.																																									.	.
Template Conservation																										.	.	.	.	.	.
Template Sequence		S	R	G	L	A	K	Q	V	A	E	K	G	I	R	V	N	I	V	A	P	G	P	I	W	.	.	.	.	.	.	T	A	L	Q	I	S	G	G	Q	T	Q	D	K	I	P	Q	F	G	Q	Q	T	P	M	K	R	A	G	Q	P	A	E	L	A	P	V	Y	V	Y	L	A	S	Q	E	S	S	Y	V	T	A	E
Template Known Secondary structure										G	G	G	T										S	B		.	.	.	.	.	.						T	T	T	S		G	G	G	S	T	T	T	T	T	T	S	T	T	S	S		B		G	G	G	G									S	G	G	G	T	T			S
Template Predicted Secondary structure																										.	.	.	.	.	.
Template SS confidence
		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.							.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
		204	.	.	.	.	.	210	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	F	E	A	A	G	P	E	V	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	H	G	V	C	G	G	E	H	L
Template Known Secondary structure						S	T	T
Template Predicted Secondary structure
Template SS confidence
		284	.	.	.	.	.	290	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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