Job Description P75822 Confidence 99.30% Date Thu Jan 5 12:14:36 GMT 2012 Rank 132 Aligned Residues 206 % Identity 20% Template c3qljB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:short chain dehydrogenase; PDBTitle: crystal structure of a short chain dehydrogenase from mycobacterium2 avium Resolution 1.80 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.																	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.
Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	R	I	L	V	L	G	A	S	G	Y	I	G	Q	H	L	V	R	T	L	S	Q	Q	G	H	Q	I	L	A	A	A	R	H	V	D	R	L	A	K	L	Q	L	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	V	S	C	H	K	V	D	L	S	W	P	D	N	L	P	A	L	L	Q	D
Query Conservation																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	V	V	I	V	T	G	A	G	G	G	I	G	R	A	H	A	L	A	F	A	A	E	G	A	R	V	V	V	N	D	I	G	V	G	L	D	G	S	P	A	S	G	G	S	A	A	Q	S	V	V	D	E	I	T	A	A	G	G	E	A	V	A	D	G	S	N	V	A	D	W	D	Q	A	A	G	L	I	Q	T
Template Known Secondary structure							T	T	T	T	S													T	T										B		T	T	S	S	B	T		T	T	S												T	T										T	T	S
Template Predicted Secondary structure
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
									67	.	.	70	.	.	.	.	.	.	.	.	.	80											.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.											.	.	.	.	.	.	.	.	110	.	.	.	.			.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.														.	.
Query SS confidence		.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.														.	.
Query Sequence		.	.	.	.	.	.	.	I	D	T	V	Y	F	L	V	H	S	M	G	E	G	.	.	.	.	.	.	.	.	.	.	G	D	F	I	A	Q	E	R	Q	V	A	L	N	V	R	D	A	L	R	E	V	.	.	.	.	.	.	.	.	.	.	P	V	K	Q	L	I	F	L	S	S	L	Q	A	.	.	P	P	H
Query Conservation		.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.														.	.
Alig confidence		.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.														.	.
Template Conservation
Template Sequence		A	V	E	T	F	G	G	L	D	V	L	V	N	N	A	G	I	V	R	D	R	M	I	A	N	T	S	E	E	E	F	D	A	V	I	A	V	H	L	K	G	H	F	A	T	M	R	H	A	A	A	Y	W	R	G	L	S	K	A	G	K	A	V	D	G	R	I	I	N	T	S	S	G	A	G	L	Q	G	S	V
Template Known Secondary structure							S															B		G	G	G																																		T	T																			B	T
Template Predicted Secondary structure
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.								.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
Predicted Secondary structure																			.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.
Query Sequence		E	Q	S	D	H	L	R	A	R	Q	A	T	A	D	I	L	R	.	.	.	.	.	.	.	E	A	N	V	P	V	T	E	L	R	A	G	I	I	V	G	A	G	S	A	A	F	E	V	M	R	D	M	V	Y	N	L	P	V	L	T	P	P	R	W	V	R	S	R	T	T	P	I	A	L	E	N	L	L	H	Y
Query Conservation																			.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	Q	G	N	Y	S	A	A	K	A	G	I	A	T	L	T	L	V	G	A	A	E	M	G	R	Y	G	V	T	V	N	A	I	A	P	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	R	T	R	F	D	A	M	A	P	E	N	V	S	P	L
Template Known Secondary structure		T	B																						G	G	G	T										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T					T	T		G	G	G	T
Template Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.																													.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
		191	.	.	.	.			.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.																		.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure							.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence							.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	V	A	L	L	.	.	D	H	P	A	S	E	H	R	I	F	E	A	A	G	P	E	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	S	Y	Q	Q	Q	F	E	H	F	M	A	V	S	G	K	R	R	W	L	I	P	I	P
Query Conservation							.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	V	W	L	G	S	A	E	A	R	D	V	T	G	K	V	F	E	V	E	G	G	K	I	R	V	A	E	G	W	A	H	G	P	Q	I	D	K	G	A	R	W	D	P	A	E	L	G	P	V	V	A	D	L	L	G	K	A	R	P	P	V	P	V	Y
Template Known Secondary structure						T	S	G	G	G	T	T			S							T	T																	S	S				G	G	G												S							B
Template Predicted Secondary structure
Template SS confidence
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions