Job Description P75822 Confidence 99.42% Date Thu Jan 5 12:14:36 GMT 2012 Rank 106 Aligned Residues 203 % Identity 18% Template c3ppiA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:3-hydroxyacyl-coa dehydrogenase type-2; PDBTitle: crystal structure of 3-hydroxyacyl-coa dehydrogenase type-2 from2 mycobacterium avium Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.				.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.								.	.	70	.	.
Predicted Secondary structure																																												.	.	.																								.	.	.	.	.	.	.
Query SS confidence																																												.	.	.																								.	.	.	.	.	.	.
Query Sequence		Q	R	I	L	V	L	G	A	S	G	Y	I	G	Q	H	L	V	R	T	L	S	Q	Q	G	H	Q	I	L	A	A	A	R	H	V	D	R	L	A	K	L	Q	L	.	.	.	A	N	V	S	C	H	K	V	D	L	S	W	P	D	N	L	P	A	L	L	Q	D	I	.	.	.	.	.	.	.	D	T	V	Y	F
Query Conservation																																												.	.	.																								.	.	.	.	.	.	.
Alig confidence																																												.	.	.																								.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	S	A	I	V	S	G	G	A	G	G	L	G	E	A	T	V	R	R	L	H	A	D	G	L	G	V	V	I	A	D	L	A	A	E	K	G	K	A	L	A	D	E	L	G	N	R	A	E	F	V	S	T	N	V	T	S	E	D	S	V	L	A	A	I	E	A	A	N	Q	L	G	R	L	R	Y	A	V	V	A
Template Known Secondary structure								T	T	T	S													T	T								S														T	T								T	T													T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		73	.	.	.	.	.	.	80																.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.											.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120			.	.	.	.	.
Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.																							.	.
Query SS confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.																							.	.
Query Sequence		L	V	H	S	M	G	E	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	D	F	I	A	Q	E	R	Q	V	A	L	N	V	R	D	A	L	.	.	.	.	.	.	.	.	.	.	R	E	V	P	V	K	Q	L	I	F	L	S	S	L	Q	A	P	P	H	E	Q	S	.	.	D	H	L	R	A
Query Conservation										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.																							.	.
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.																							.	.
Template Conservation
Template Sequence		H	G	G	F	G	V	A	Q	R	I	V	Q	R	D	G	S	P	A	D	M	G	G	F	T	K	T	I	D	L	Y	L	N	G	T	Y	N	V	A	R	L	V	A	A	S	I	A	A	A	E	P	R	E	N	G	E	R	G	A	L	V	L	T	A	S	I	A	G	Y	E	G	Q	I	G	Q	T	A	Y	A	A	A
Template Known Secondary structure											S	B		T	T	S		B														T																T	S				T	T	S											G	G	G	T	S			T	T
Template Predicted Secondary structure
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		126	.	.	.	130	.	.	.	.								.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.			.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.																			.	.
Query SS confidence											.	.	.	.	.	.	.																			.	.
Query Sequence		R	Q	A	T	A	D	I	L	R	.	.	.	.	.	.	.	E	A	N	V	P	V	T	E	L	R	A	G	I	I	V	G	A	G	.	.	S	A	A	F	E	V	M	R	D	M	V	Y	N	L	P	V	L	T	P	P	R	W	V	R	S	R	T	T	P	I	A	L	E	N	L	L	H	Y	L	V	A	L	L	D
Query Conservation											.	.	.	.	.	.	.																			.	.
Alig confidence											.	.	.	.	.	.	.																			.	.																				.	.	.	.	.	.	.	.	.
Template Conservation																																																									.	.	.	.	.	.	.	.	.
Template Sequence		K	A	G	V	I	G	L	T	I	A	A	A	R	D	L	S	S	A	G	I	R	V	N	T	I	A	P	G	T	M	K	T	P	I	M	E	S	V	G	E	E	A	L	A	K	F	A	A	N	I	P	F	P	K	R	.	.	.	.	.	.	.	.	.	L	G	T	P	D	E	F	A	D	A	A	A	F	L	L	T
Template Known Secondary structure																	G	G	G	T										S	B							T	T											T			S	S	S	S	.	.	.	.	.	.	.	.	.		B
Template Predicted Secondary structure																																																									.	.	.	.	.	.	.	.	.
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.										.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	P	A	S	E	H	R	I	F	E	A	A	G	P	E	V	L	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	G	Y	I	N	G	E	V	M	R	L	D	G	A	Q	R	F	T
Template Known Secondary structure			S	S			S						S	T	T
Template Predicted Secondary structure
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions