Job Description P75822 Confidence 99.96% Date Thu Jan 5 12:14:36 GMT 2012 Rank 75 Aligned Residues 195 % Identity 12% Template c3nzoB_ PDB info PDB header:lyase Chain: B: PDB Molecule:udp-n-acetylglucosamine 4,6-dehydratase; PDBTitle: udp-n-acetylglucosamine 4,6-dehydratase from vibrio fischeri. Resolution 2.10 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.		.	.	.	30	.	.	.	.	.	.	.	.											.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.			.	.	.	.
Predicted Secondary structure																										.													.	.	.	.	.	.	.	.	.	.																												.	.
Query SS confidence																										.													.	.	.	.	.	.	.	.	.	.																												.	.
Query Sequence		Q	R	I	L	V	L	G	A	S	G	Y	I	G	Q	H	L	V	R	T	L	S	Q	Q	G	.	H	Q	I	L	A	A	A	R	H	V	D	R	.	.	.	.	.	.	.	.	.	.	L	A	K	L	Q	L	A	N	V	S	C	H	K	V	D	L	S	W	P	D	N	L	P	A	L	L	Q	.	.	D	I	D	T
Query Conservation																										.													.	.	.	.	.	.	.	.	.	.																												.	.
Alig confidence																										.													.	.	.	.	.	.	.	.	.	.																												.	.
Template Conservation
Template Sequence		S	R	F	L	V	L	G	G	A	G	S	I	G	Q	A	V	T	K	E	I	F	K	R	N	P	Q	K	L	H	V	V	D	I	S	E	N	N	X	V	E	L	V	R	D	I	R	S	S	F	G	Y	I	N	G	D	F	Q	T	F	A	L	D	I	G	S	I	E	Y	D	A	F	I	K	A	D	G	Q	Y	D	Y
Template Known Secondary structure								T	T	T	S												T	T			S							S																				S	S									T	T	S														S
Template Predicted Secondary structure
Template SS confidence
		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
		70	.	.	.	.	.	.	.	.									.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.			.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.																																																										.	.
Query SS confidence											.	.	.	.	.	.	.	.																																																										.	.
Query Sequence		V	Y	F	L	V	H	S	M	G	.	.	.	.	.	.	.	.	E	G	G	D	F	I	A	Q	E	R	Q	V	A	L	N	V	R	D	A	L	R	E	V	P	V	K	Q	L	I	F	L	S	S	L	Q	A	P	P	H	E	Q	S	D	H	L	R	A	R	Q	A	T	A	D	I	L	R	E	.	.	A	N	V	P
Query Conservation											.	.	.	.	.	.	.	.																																																										.	.
Alig confidence											.	.	.	.	.	.	.	.																																							.																			.	.
Template Conservation																																																									.
Template Sequence		V	L	N	L	S	A	L	K	H	V	R	S	E	K	D	P	F	T	L	X	R	X	I	D	V	N	V	F	N	T	D	K	T	I	Q	Q	S	I	D	A	G	A	K	K	Y	F	C	V	S	T	D	K	A	A	N	.	P	V	N	X	X	G	A	S	K	R	I	X	E	X	F	L	X	R	K	S	E	E	I	A
Template Known Secondary structure											G	G	G	G	S	S												T													T	T		S								S		S	S		.			S																	T	T	T	S
Template Predicted Secondary structure																																																									.
Template SS confidence
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.		.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	T	E	L	R	A	G	I	I	V	G	A	G	S	A	A	F	E	V	M	R	D	M	V	Y	N	L	P	V	L	T	P	P	R	W	V	R	S	R	T	T	P	I	A	L	E	N	L	L	H	Y	L	V	A	L	L	D	H	P	A	S	E	H	R	I	F	E	A	A	G	P	E	V	L	S
Query Conservation
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.
Template Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.
Template Sequence		I	S	T	A	R	F	A	N	V	A	F	S	D	G	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	I	Q	K	N	Q	P	I	K	R	Y	F	V	T	P	Q	E	S	G	E	L	C	L	X	S	C	I	F	G	E	N	.	R	D	I	F	F	P	K	D	X	A	R	F	D
Template Known Secondary structure										B	T	T		T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T	T	T								B																		T	.	T									S	S		S
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.
Template SS confidence
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.																.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.		.	.	240	.	.	.	.	.	.	.	.	.	250

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions