Job Description P75822 Confidence 99.09% Date Thu Jan 5 12:14:36 GMT 2012 Rank 227 Aligned Residues 198 % Identity 15% Template c3nugA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:3-oxoacyl-(acyl-carrier protein) reductase; PDBTitle: crystal structure of wild type tetrameric pyridoxal 4-dehydrogenase2 from mesorhizobium loti Resolution 1.79 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.				.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.								.	.	.	.	.	70	.	.
Predicted Secondary structure																																												.	.	.																					.	.	.	.	.	.	.
Query SS confidence																																												.	.	.																					.	.	.	.	.	.	.
Query Sequence		Q	R	I	L	V	L	G	A	S	G	Y	I	G	Q	H	L	V	R	T	L	S	Q	Q	G	H	Q	I	L	A	A	A	R	H	V	D	R	L	A	K	L	Q	L	.	.	.	A	N	V	S	C	H	K	V	D	L	S	W	P	D	N	L	P	A	L	L	.	.	.	.	.	.	.	Q	D	I	D	T	V	Y	F
Query Conservation																																												.	.	.																					.	.	.	.	.	.	.
Alig confidence																																												.	.	.																					.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	T	A	L	V	T	G	A	A	Q	G	I	G	K	A	I	A	A	R	L	A	A	D	G	A	T	V	I	V	S	D	I	N	A	E	G	A	K	A	A	A	A	S	I	G	K	K	A	R	A	I	A	A	D	I	S	D	P	G	S	V	K	A	L	F	A	E	I	Q	A	L	T	G	G	I	D	I	L	V	N
Template Known Secondary structure							T	T	T	T	S													T	T								S	S													T	T								T	T																	S			S
Template Predicted Secondary structure
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		73	.	.	.	.	.	.	80																.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.			.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.																					.
Query SS confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.																					.
Query Sequence		L	V	H	S	M	G	E	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	D	F	I	A	Q	E	R	Q	V	A	L	N	V	R	D	A	L	R	E	V	P	V	K	Q	L	I	F	L	S	S	L	Q	A	.	.	P	P	H	E	Q	S	D	H	L	R	A	R	Q	A	T	A	D	I	L	R	.
Query Conservation										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.																					.
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.																					.
Template Conservation
Template Sequence		N	A	S	I	V	P	F	V	A	W	D	D	V	D	L	D	H	W	R	K	I	I	D	V	N	L	T	G	T	F	I	V	T	R	A	G	T	D	Q	M	R	A	A	G	K	A	G	R	V	I	S	I	A	S	N	T	F	F	A	G	T	P	N	M	A	A	Y	V	A	A	K	G	G	V	I	G	F	T	R	A
Template Known Secondary structure											G	G	G														T																		T											T					T		S	S
Template Predicted Secondary structure
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
								135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.				.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.			.	.
Predicted Secondary structure		.	.	.	.	.	.																		.	.	.																																																			.	.
Query SS confidence		.	.	.	.	.	.																		.	.	.																																																			.	.
Query Sequence		.	.	.	.	.	.	E	A	N	V	P	V	T	E	L	R	A	G	I	I	V	G	A	.	.	.	G	S	A	A	F	E	V	M	R	D	M	V	Y	N	L	P	V	L	T	P	P	R	W	V	R	S	R	T	T	P	I	A	L	E	N	L	L	H	Y	L	V	A	L	L	D	H	P	A	S	E	.	.	H	R
Query Conservation		.	.	.	.	.	.																		.	.	.																																																			.	.
Alig confidence		.	.	.	.	.	.																		.	.	.																			.	.	.	.	.	.	.	.	.	.																							.	.
Template Conservation																																														.	.	.	.	.	.	.	.	.	.
Template Sequence		L	A	T	E	L	G	K	Y	N	I	T	A	N	A	V	T	P	G	L	I	E	S	D	G	V	K	A	S	P	H	N	E	A	F	G	F	V	E	M	L	Q	A	M	K	.	.	.	.	.	.	.	.	.	.	G	K	G	Q	P	E	H	I	A	D	V	V	S	F	L	A	S	D	D	A	R	W	I	T	G	Q
Template Known Secondary structure							G	G	G	T										S	B							T	S	G	G	G	G	G								S	S	S		.	.	.	.	.	.	.	.	.	.	S		B														S	G	G	G	T	T			S
Template Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.											.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
		204	.	.	.	.	.	210
Predicted Secondary structure
Query SS confidence
Query Sequence		I	F	E	A	A	G	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	L	N	V	D	A	G
Template Known Secondary structure						S	T	T
Template Predicted Secondary structure
Template SS confidence
		238	.	240	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions