Job Description P75822 Confidence 99.21% Date Thu Jan 5 12:14:36 GMT 2012 Rank 174 Aligned Residues 203 % Identity 16% Template c3lf2B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:short chain oxidoreductase q9hya2; PDBTitle: nadph bound structure of the short chain oxidoreductase q9hya2 from2 pseudomonas aeruginosa pao1 containing an atypical catalytic center Resolution 2.30 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.									.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.								.	.
Predicted Secondary structure																																										.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.
Query SS confidence																																										.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.
Query Sequence		Q	R	I	L	V	L	G	A	S	G	Y	I	G	Q	H	L	V	R	T	L	S	Q	Q	G	H	Q	I	L	A	A	A	R	H	V	D	R	L	A	K	L	.	.	.	.	.	.	.	.	Q	L	A	N	V	S	C	H	K	V	D	L	S	W	P	D	N	L	P	A	L	L	Q	.	.	.	.	.	.	.	D	I
Query Conservation																																										.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.
Alig confidence																																										.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	V	A	V	V	T	G	G	S	S	G	I	G	L	A	T	V	E	L	L	L	E	A	G	A	A	V	A	F	C	A	R	D	G	E	R	L	R	A	A	E	S	A	L	R	Q	R	F	P	G	A	R	L	F	A	S	V	C	D	V	L	D	A	L	Q	V	R	A	F	A	E	A	C	E	R	T	L	G	C	A
Template Known Secondary structure								S		S	S													T	T								S																S	T	T										T	T																		S
Template Predicted Secondary structure
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		68	.	70	.	.	.	.	.	.	.	.	.	80															.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120			.	.	.	.	.	.	.	.	.	130	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.																																									.	.
Query SS confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.																																									.	.
Query Sequence		D	T	V	Y	F	L	V	H	S	M	G	E	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	D	F	I	A	Q	E	R	Q	V	A	L	N	V	R	D	A	L	R	E	V	P	V	K	Q	L	I	F	L	S	S	L	Q	A	P	P	H	E	Q	S	.	.	D	H	L	R	A	R	Q	A	T	A	D
Query Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.																																									.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.																																									.	.
Template Conservation
Template Sequence		S	I	L	V	N	N	A	G	Q	G	R	V	S	T	F	A	E	T	T	D	E	A	W	S	E	E	L	Q	L	K	F	F	S	V	I	H	P	V	R	A	F	L	P	Q	L	E	S	R	A	D	A	A	I	V	C	V	N	S	L	L	A	S	Q	P	E	P	H	M	V	A	T	S	A	A	R	A	G	V	K	N
Template Known Secondary structure		S												B		S	T	T																													T	T	S	S	S									G	G	G	T	S			T	T	B
Template Predicted Secondary structure
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		132	.	.								.	.	.	.	.	140	.	.	.	.	.	.	.	.	.										150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure					.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.
Query SS confidence					.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.
Query Sequence		I	L	R	.	.	.	.	.	.	.	E	A	N	V	P	V	T	E	L	R	A	G	I	I	V	.	.	.	.	.	.	.	.	.	G	A	G	S	A	A	F	E	V	M	R	D	M	V	Y	N	L	P	V	L	T	P	P	R	W	V	R	S	R	T	T	P	I	A	L	E	N	L	L	H	Y	L	V	A	L	L
Query Conservation					.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.																											.	.	.	.	.
Template Conservation																																																														.	.	.	.	.
Template Sequence		L	V	R	S	M	A	F	E	F	A	P	K	G	V	R	V	N	G	I	L	I	G	L	V	E	S	G	Q	W	R	R	R	F	E	A	R	E	E	R	E	L	D	W	A	Q	W	T	A	Q	L	A	R	N	K	Q	I	P	L	G	R	.	.	.	.	.	L	G	K	P	I	E	A	A	R	A	I	L	F	L	A
Template Known Secondary structure											G	G	G	T										S	B		S									T		S		T	T														T	T		T	T	S	S	.	.	.	.	.		B
Template Predicted Secondary structure																																																														.	.	.	.	.
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.						.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
		196	.	.	.			200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure						.	.
Query SS confidence						.	.
Query Sequence		D	H	P	A	.	.	S	E	H	R	I	F	E	A	A	G	P
Query Conservation						.	.
Alig confidence						.	.
Template Conservation
Template Sequence		S	P	L	S	A	Y	T	T	G	S	H	I	D	V	S	G	G
Template Known Secondary structure		S	G	G	G	T	T			S						S	S	S
Template Predicted Secondary structure
Template SS confidence
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions