Job Description P75822 Confidence 99.97% Date Thu Jan 5 12:14:36 GMT 2012 Rank 53 Aligned Residues 261 % Identity 16% Template c3iusB_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized conserved protein; PDBTitle: the structure of a functionally unknown conserved protein2 from silicibacter pomeroyi dss Resolution 1.66 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	Q	R	I	L	V	L	G	A	S	G	Y	I	G	Q	H	L	V	R	T	L	S	Q	Q	G	H	Q	I	L	A	A	A	R	H	V	D	R	L	A	K	L	Q	L	A	N	V	S	C	H	K	V	D	L	S	W	P	D	N	L	P	A	L	L	Q	D	I	D	T	V	Y	F	L	V	H	S	M	G	E	G	G
Query Conservation
Alig confidence											.																																																.	.	.	.	.																	.	.
Template Conservation											.																																																.	.	.	.	.																	.	.
Template Sequence		T	G	T	L	L	S	F	G	H	.	G	Y	T	A	R	V	L	S	R	A	L	A	P	Q	G	W	R	I	I	G	T	S	R	N	P	D	Q	X	E	A	I	R	A	S	G	A	E	P	L	L	W	P	G	E	E	P	S	.	.	.	.	.	L	D	G	V	T	H	L	L	I	S	T	A	P	D	S	G	.	.
Template Known Secondary structure									T		.												G	G	G	T								S		G	G	G							T	T	S					T	T	T	S				.	.	.	.	.		T	T											B	T	T	.	.
Template Predicted Secondary structure											.																																																.	.	.	.	.																	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10		.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.						.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.														.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.		.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.	.	.																					.
Query SS confidence																																					.	.	.	.	.	.	.	.	.	.	.	.	.																					.
Query Sequence		D	F	I	A	Q	E	R	Q	V	A	L	N	V	R	D	A	L	R	E	V	P	V	K	Q	L	I	F	L	S	S	L	Q	A	P	P	.	.	.	.	.	.	.	.	.	.	.	.	.	H	E	Q	S	D	H	L	R	A	R	Q	A	T	A	D	I	L	R	E	A	.	N	V	P	V	T	E	L	R	A	G	I
Query Conservation																																					.	.	.	.	.	.	.	.	.	.	.	.	.																					.
Alig confidence		.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.																					.
Template Conservation		.	.	.
Template Sequence		.	.	.	G	D	P	V	L	A	A	L	G	D	Q	I	A	A	R	A	A	Q	F	R	W	V	G	Y	L	S	T	T	A	V	Y	G	D	H	D	G	A	W	V	D	E	T	T	P	L	T	P	T	A	A	R	G	R	W	R	V	X	A	E	Q	Q	W	Q	A	V	P	N	L	P	L	H	V	F	R	L	A	G
Template Known Secondary structure		.	.	.	B														T	G	G	G		S								G	G	G	S				T	T					T	T	S						S															T	S	T	T
Template Predicted Secondary structure		.	.	.
Template SS confidence
					74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	V	G	A	G	S	A	A	F	E	V	M	R	D	M	V	Y	N	L	P	V	L	T	P	P	R	W	V	R	S	R	T	T	P	I	A	L	E	N	L	L	H	Y	L	V	A	L	L	D	H	P	A	S	E	H	R	I	F	E	A	A	G	P	E	V	L	S	Y	Q	Q	Q	F	E	H	F	M	A	V	S	G
Query Conservation
Alig confidence									.	.	.	.	.	.	.	.	.	.																																					.
Template Conservation									.	.	.	.	.	.	.	.	.	.																																					.
Template Sequence		I	Y	G	P	G	R	G	.	.	.	.	.	.	.	.	.	.	P	F	G	G	I	R	R	I	I	K	P	G	Q	V	F	S	R	I	H	V	E	D	I	A	Q	V	L	A	A	S	X	A	R	P	D	P	.	G	A	V	Y	N	V	C	D	D	E	P	V	P	P	Q	D	V	I	A	Y	A	A	E	L	Q	G
Template Known Secondary structure				B	T	T	B	S	.	.	.	.	.	.	.	.	.	.											T	T			B																		S			T	.	T								S			B													T	T
Template Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.																																					.
Template SS confidence
		151	.	.	.	.	.	.											.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.		.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.			.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
Predicted Secondary structure																																																												.	.
Query SS confidence																																																												.	.
Query Sequence		K	R	R	W	L	I	P	I	P	L	P	T	R	W	I	S	V	W	F	L	N	V	I	T	S	V	P	P	T	T	A	R	A	L	I	Q	G	L	K	H	D	L	L	A	D	D	T	A	L	R	A	L	I	P	Q	R	L	I	.	.	A	F	D	D	A	V	R	S	T	L	K	E	E	E	K
Query Conservation																																																												.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.
Template Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	P	L	P	P	A	V	D	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	K	A	D	L	T	P	X	A	R	S	F	Y	S	E	N	K	R	V	R	N	D	R	I	K	E	E	L	G	V	R	L	K	Y	P	N	Y	R	V	G	L	E	A	L	Q	A	D	A	E	T
Template Known Secondary structure										G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G											T	T													T	T					S			S
Template Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		225	.	.	.	.	230	.	.	.																	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions