|   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | |
. | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | |
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | 70 | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
| . |
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  | . | . | . | . | . | . | . | . | . |  |  |  |
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | R | I | L | V | L | G | A | S | G | Y | I | G | Q | H | L | V | R | T | L | S | Q | Q | . |
G | H | Q | I | L | A | A | A | R | H | V | D | R | L | A | K | L | Q | L | A | N | V | S | C | H | K | V | D | L | S | W | P | D | N | L | P | . |
. |
. |
. |
. |
. |
. |
. |
. |
A | L | L | Q | D | I | D | T | V | Y | F |
Query Conservation |   |
|   |
|
|
|
|
|
|
|
|   |
|
|   |   |
|
|   |   |
|
|   |   | . |
|   |   |
|   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|   |   |
|
|   |
|   |   |   |
|   | . | . | . | . | . | . | . | . | . |   |
|
|   |
|
|
|   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|
|
|
|
|
|
|
|   |
|   |
|
|
|
|
|
|   |   |
|
|   |   |
|
|   |   |
|   |   |
|   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|
Template Sequence |   |
K | K | A | G | V | L | G | A | T | G | S | V | G | Q | R | F | I | L | L | L | S | K | H | P | E | F | E | I | H | A | L | G | A | S | S | R | S | A | G | K | K | Y | K | D | A | A | S | W | K | Q | T | E | T | L | P | E | T | E | Q | D | I | V | V | Q | E | C | K | P | E | G | N | F | L | E | C | D | V | V | F | S |
Template Known Secondary structure |   |
 |  |  |  |  |  | T | T | T | S |  |  |  |  |  |  |  |  |  |  |  | T |
| T | T |  |  |  |  |  |  |  |  |
| T | T | T | T | T | S | B |  |  |  |  |
|
|
|
|
| S | S |
|
|
|  |  |  |  | T |
| B |
|  |  | S | S | S | S | S | G | G | G | G |
| S |  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |
|
|
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
4 | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . |
  |
  |   |
73 | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
. | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . |
Predicted Secondary structure |   |
 |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | V | H | S | M | G | E | G | G | D | F | I | A | Q | E | R | Q | V | A | L | N | V | R | D | A | L | R | E | V | P | V | K | Q | L | I | F | L | S | S | L | Q | A | P | P | H | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
E | Q | S | D | H | L | R | A | R | Q | A | T | A | D | I | L | R | E | A | N | V | P | V | T | E |
Query Conservation |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |
|
|   |   |   |   |
|   |
|   |
|   |   |
|
|   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . |   |   |
|   |
|   |   |
|
|   |   |   |
|   |   |
|   |   |   |
|
|   |   |
|
|
Alig confidence |   |
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|   |
|   |   |   |   |   |   |
|   |   |   |
| . |   |   |
|
|
|
|
|
|
|
|
|
|   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
Template Sequence |   |
G | L | D | A | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
D | V | A | G | D | I | E | K | S | F | V | E | A | G | . |
L | A | V | V | S | N | A | K | N | Y | R | R | E | K | D | V | P | L | V | V | P | I | V | N | P | E | H | I | D | V | V | E | N | K | V | K | Q | A | V | S | K | G | G | K | K | P | G | F | I |
Template Known Secondary structure |   |
|
|
|  | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  | T | T | . |
|  |  |  |  |
| S | S | T | T | T | T |
| T | T | S |
|  |  |
| T | T | T |
| G | G | G | G |  |  |  |  |  |  |  |  |  |  |  |  |  | T | S | S |
|
|
|  |  |
Template Predicted Secondary structure |   |
 |
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . |
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
84 | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
. | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | |
. | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 |
  |
  |   |
143 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
Query Sequence |   |
L | R | A | G | I | I | V |
Query Conservation |   |
|
|   |   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|
|   |
Template Sequence |   |
I | C | I | S | N | C | S |
Template Known Secondary structure |   |
 |  |  |
|
|  |  |
Template Predicted Secondary structure |   |
 |  |
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
  |   |
151 | . | . | . | . | . | . |
  |