Job Description P75822 Confidence 98.99% Date Thu Jan 5 12:14:36 GMT 2012 Rank 268 Aligned Residues 144 % Identity 20% Template c3guyE_ PDB info PDB header:oxidoreductase Chain: E: PDB Molecule:short-chain dehydrogenase/reductase sdr; PDBTitle: crystal structure of a short-chain dehydrogenase/reductase from vibrio2 parahaemolyticus Resolution 1.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.				.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.					.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																																												.	.	.																						.	.	.	.
Query SS confidence																																												.	.	.																						.	.	.	.
Query Sequence		I	L	V	L	G	A	S	G	Y	I	G	Q	H	L	V	R	T	L	S	Q	Q	G	H	Q	I	L	A	A	A	R	H	V	D	R	L	A	K	L	Q	L	A	N	.	.	.	V	S	C	H	K	V	D	L	S	W	P	D	N	L	P	A	L	L	Q	D	I	.	.	.	.	D	T	V	Y	F	L	V	H	S	M
Query Conservation																																												.	.	.																						.	.	.	.
Alig confidence																																												.	.	.																						.	.	.	.
Template Conservation
Template Sequence		I	V	I	T	G	A	S	S	G	L	G	A	E	L	A	K	L	Y	D	A	E	G	K	A	T	Y	L	T	G	R	S	E	S	K	L	S	T	V	T	N	C	L	S	N	N	V	G	Y	R	A	R	D	L	A	S	H	Q	E	V	E	Q	L	F	E	Q	L	D	S	I	P	S	T	V	V	H	S	A	G	S	G
Template Known Secondary structure						S	T	T	S													T	T								S										T	T		S	S									T	T											T		S	S			S
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		78	.	80															.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.		.	.	.	.	.	.	.	.	130	.	.	.	.								.
Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.																																										.														.	.	.	.	.	.	.
Query SS confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.																																										.														.	.	.	.	.	.	.
Query Sequence		G	E	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	D	F	I	A	Q	E	R	Q	V	A	L	N	V	R	D	A	L	R	E	V	P	V	K	Q	L	I	F	L	S	S	L	Q	A	P	P	H	E	Q	S	D	.	H	L	R	A	R	Q	A	T	A	D	I	L	R	.	.	.	.	.	.	.	E
Query Conservation					.	.	.	.	.	.	.	.	.	.	.	.	.	.																																										.														.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.																																										.														.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	F	G	L	L	Q	E	Q	D	P	E	Q	I	Q	T	L	I	E	N	N	L	S	S	A	I	N	V	L	R	E	L	V	K	R	Y	K	D	Q	P	V	N	V	V	M	I	M	S	T	A	A	Q	Q	P	K	A	Q	E	S	T	Y	C	A	V	K	W	A	V	K	G	L	I	E	S	V	R	L	E	L	K	G
Template Known Secondary structure				S		G	G	G	S																												T	T	S										G	G	G	T	S			T	T																						T	T	T
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		136	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	N	V	P	V	T	E	L	R	A	G	I	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	P	M	K	I	I	A	V	Y	P	G	G	M
Template Known Secondary structure		S	S
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions