Job Description P75822 Confidence 99.18% Date Thu Jan 5 12:14:36 GMT 2012 Rank 187 Aligned Residues 193 % Identity 15% Template c3diiB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:short-chain dehydrogenase/reductase sdr; PDBTitle: crystal structure of a carbohydrate specific scor enzyme2 from clostridium thermocellum, ligand-free form Resolution 1.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.			.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.								.	.	.	.	70	.	.	.
Predicted Secondary structure																																														.	.																				.	.	.	.	.	.	.
Query SS confidence																																														.	.																				.	.	.	.	.	.	.
Query Sequence		Q	R	I	L	V	L	G	A	S	G	Y	I	G	Q	H	L	V	R	T	L	S	Q	Q	G	H	Q	I	L	A	A	A	R	H	V	D	R	L	A	K	L	Q	L	A	N	.	.	V	S	C	H	K	V	D	L	S	W	P	D	N	L	P	A	L	L	Q	.	.	.	.	.	.	.	D	I	D	T	V	Y	F	L
Query Conservation																																														.	.																				.	.	.	.	.	.	.
Alig confidence																																														.	.																				.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	G	V	I	V	T	G	G	G	H	G	I	G	K	Q	I	C	L	D	F	L	E	A	G	D	K	V	C	F	I	D	I	D	E	K	R	S	A	D	F	A	K	E	R	P	N	L	F	Y	F	H	G	D	V	A	D	P	L	T	L	K	K	F	V	E	Y	A	M	E	K	L	Q	R	I	D	V	L	V	N	N
Template Known Secondary structure								S	T	T	S													T	T								S										T	T		T	T								T	T																	S
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		74	.	.	.	.	.	80														.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.		.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.																																										.																.	.	.
Query SS confidence									.	.	.	.	.	.	.	.	.	.	.	.	.																																										.																.	.	.
Query Sequence		V	H	S	M	G	E	G	.	.	.	.	.	.	.	.	.	.	.	.	.	G	D	F	I	A	Q	E	R	Q	V	A	L	N	V	R	D	A	L	R	E	V	P	V	K	Q	L	I	F	L	S	S	L	Q	A	P	P	H	E	Q	S	D	.	H	L	R	A	R	Q	A	T	A	D	I	L	R	E	A	.	.	.
Query Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.																																										.																.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.																																										.																.	.	.
Template Conservation
Template Sequence		A	C	G	S	K	G	I	L	S	S	L	L	Y	E	E	F	D	Y	I	L	S	V	G	L	K	A	P	Y	E	L	S	R	L	C	R	D	E	L	I	K	N	K	G	R	I	I	N	I	A	S	T	R	A	F	Q	S	E	P	D	S	E	A	Y	A	S	A	K	G	G	I	V	A	L	T	H	A	L	A	M	S
Template Known Secondary structure								G	G	G	T														T										T								T									G	G	G	T	S			T	T
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
					137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	N	V	P	V	T	E	L	R	A	G	I	I	V	G	A	G	S	A	A	F	E	V	M	R	D	M	V	Y	N	L	P	V	L	T	P	P	R	W	V	R	S	R	T	T	P	I	A	L	E	N	L	L	H	Y	L	V	A	L	L	D	H	P	A	S	E	H	R	I	F	E	A	A	G	P
Query Conservation		.	.	.
Alig confidence		.	.	.																			.	.	.	.	.											.	.	.	.	.	.	.	.	.	.
Template Conservation																							.	.	.	.	.											.	.	.	.	.	.	.	.	.	.
Template Sequence		L	G	P	D	V	L	V	N	C	I	A	P	G	W	I	N	V	T	E	F	T	.	.	.	.	.	Q	E	D	C	A	A	I	P	A	G	.	.	.	.	.	.	.	.	.	.	K	V	G	T	P	K	D	I	S	N	M	V	L	F	L	C	Q	Q	D	F	I	T	G	E	T	I	I	V	D	G	G
Template Known Secondary structure			T	T	T	S									S	B							.	.	.	.	.						T	S	T	T	S	.	.	.	.	.	.	.	.	.	.	S		B														T		S	S			S						S	T	T
Template Predicted Secondary structure																							.	.	.	.	.											.	.	.	.	.	.	.	.	.	.
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.						.	.	.	.	.	190	.	.	.	.											.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions