Job Description P75822 Confidence 99.21% Date Thu Jan 5 12:14:36 GMT 2012 Rank 176 Aligned Residues 176 % Identity 16% Template c3d7lG_ PDB info PDB header:structural genomics, unknown function Chain: G: PDB Molecule:lin1944 protein; PDBTitle: the crystal structure of the protein lin1944 from listeria innocua . Resolution 2.06 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.				.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																		.	.	.
Query SS confidence																																																																		.	.	.
Query Sequence		P	Q	R	I	L	V	L	G	A	S	G	Y	I	G	Q	H	L	V	R	T	L	S	Q	Q	G	H	Q	I	L	A	A	A	R	H	V	D	R	L	A	K	L	Q	L	A	N	V	S	C	H	K	V	D	L	S	W	P	D	N	L	P	A	L	L	Q	.	.	.	D	I	D	T	V	Y	F	L	V	H	S	M	G
Query Conservation																																																																		.	.	.
Alig confidence																											.												.	.	.	.	.	.	.	.	.	.	.																	.	.	.
Template Conservation																											.												.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	X	K	I	L	L	I	G	A	S	G	T	L	G	S	A	V	K	E	R	L	E	K	K	A	.	E	V	I	T	A	G	R	H	S	G	D	.	.	.	.	.	.	.	.	.	.	.	V	T	V	D	I	T	N	I	D	S	I	K	K	X	Y	E	Q	V	G	K	V	D	A	I	V	S	A	T	G	S	A	T
Template Known Secondary structure									T	T	T	S											T	T	T	S	.							S	S	S	S	S	.	.	.	.	.	.	.	.	.	.	.					T	T
Template Predicted Secondary structure																											.												.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		0	.	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.		.	.	.	.	.	30	.	.	.	.	.												.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
		79	80											.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.					.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.							.	.
Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.																						.	.	.	.																																				.	.	.	.	.	.
Query SS confidence				.	.	.	.	.	.	.	.	.	.																						.	.	.	.																																				.	.	.	.	.	.
Query Sequence		E	G	.	.	.	.	.	.	.	.	.	.	G	D	F	I	A	Q	E	R	Q	V	A	L	N	V	R	D	A	L	R	E	V	.	.	.	.	P	V	K	Q	L	I	F	L	S	S	L	Q	A	P	P	H	E	Q	S	D	H	L	R	A	R	Q	A	T	A	D	I	L	R	E	A	.	.	.	.	.	.	N	V
Query Conservation				.	.	.	.	.	.	.	.	.	.																						.	.	.	.																																				.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.	.																						.	.	.	.																																				.	.	.	.	.	.
Template Conservation
Template Sequence		F	S	P	L	T	E	L	T	P	E	K	N	A	V	T	I	S	S	K	L	G	G	Q	I	N	L	V	L	L	G	I	D	S	L	N	D	K	G	S	F	T	L	T	T	G	I	X	X	E	D	P	I	V	Q	G	A	S	A	A	X	A	N	G	A	V	T	A	F	A	K	S	A	A	I	E	X	P	R	G	I
Template Known Secondary structure					G	G	G												T	T	T									T	T	G	G	G													G	G	G	T	S			T	T																			G	G	G		S	T	T
Template Predicted Secondary structure
Template SS confidence
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	V	T	E	L	R	A	G	I	I	V	G	A	G	S	A	A	F	E	V	M	R	D	M	V	Y	N	L	P	V	L	T	P	P	R	W	V	R	S	R	T	T	P	I	A	L	E	N	L	L	H	Y	L	V	A	L	L	D	H	P	A	S	E	H	R	I	F	E	A
Query Conservation
Alig confidence												.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.																					.
Template Conservation												.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.																					.
Template Sequence		R	I	N	T	V	S	P	N	V	L	.	.	.	.	.	.	.	E	E	S	W	D	K	L	E	P	F	F	E	.	.	.	.	.	.	.	.	.	.	G	F	L	P	V	P	A	A	K	V	A	R	A	F	E	K	S	V	F	G	.	A	Q	T	G	E	S	Y	Q	V
Template Known Secondary structure											B	.	.	.	.	.	.	.	G	G	G					G	G	G	S	T	.	.	.	.	.	.	.	.	.	.	T				B															S	.				S
Template Predicted Secondary structure												.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.																					.
Template SS confidence
		148	.	150	.	.	.	.	.	.	.								.	.	160	.	.	.	.	.	.	.	.	.											170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.		190	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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