 |
| Job Description | P75822 | | Confidence | 97.14% | Date | Thu Jan 5 12:14:36 GMT 2012 |
| Rank | 498 | Aligned Residues | 68 |
| % Identity | 16% | Template | c3b1fA_ |
| PDB info |
PDB header:oxidoreductase | Chain: A: PDB Molecule:putative prephenate dehydrogenase; |
PDBTitle: crystal structure of prephenate dehydrogenase from streptococcus2 mutans
|
| Resolution | 2.10 Å |
|
| | |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | |
|
. | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . |
| Predicted Secondary structure | |
|
|  | | | |  |
|
|
|
|  | | | | | | | | | | | |
|
|
| . | . | | | | | | |
|
| | | | | |
|
|
|
|
|
|
| | | | |
|
|
|
|
| | | | | | | | |
|
|
|
| | | | | |
|
|
| Query SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence | |
P | Q | R | I | L | V | L | G | A | S | G | Y | I | G | Q | H | L | V | R | T | L | S | Q | Q | G | H | . |
. |
Q | I | L | A | A | A | R | H | V | D | R | L | A | K | L | Q | L | A | N | V | S | C | H | K | V | D | L | S | W | P | D | N | L | P | A | L | L | Q | D | I | D | T | V | Y | F | L | V | H |
| Query Conservation | |
|
| |
|
|
|
|
|
|
|
| |
|
| | |
|
| | |
|
| | |
| | . | . | |
| |
|
| |
| | | | | | | | | | | | |
|
| |
| | |
|
| |
| | | |
| | |
|
| |
|
|
| |
|
| |
|
| |
| Alig confidence | |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation | |
|
| |
| |
|
|
| | . |
| |
|
| |
|
|
| | |
| | | |
| | | | |
| | | | |
| | | | | | | |
| | | |
| | | | | | | | . | . | . | . | . | | | | | | | | | |
| |
|
|
|
|
| |
| Template Sequence | |
E | K | T | I | Y | I | A | G | L | . |
G | L | I | G | A | S | L | A | L | G | I | K | R | D | H | P | H | Y | K | I | V | G | Y | N | R | S | D | R | S | R | D | I | A | L | E | R | G | I | V | D | E | A | T | A | . |
. |
. |
. |
. |
D | F | K | V | F | A | A | L | A | D | V | I | I | L | A | V | P |
| Template Known Secondary structure | |
|
| | | | | |
|
| . | S | | | | | | | | | | | | | |
| T | T | S | | | | | |
| S | S | | | | | | | | | | T | T | S |
| S | | | | S | . | . | . | . | . |
| T | T | T | T | G | G | G |
| S | | | | |
| S |
|
| Template Predicted Secondary structure | |
|
| | | | | |
|
| . |
| | | | | | | | | | | | |
|
|
|
| | | | | | |
|
|
| | | | | | | | | |
|
|
|
|
| | |
|
| . | . | . | . | . |
| | | | | |
|
|
|
| | | | | |
|
|
| Template SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| | |
3 | . | . | . | . | . | . | 10 | . | |
. | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | |
|
|
|
|
. | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . |
| |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
| |
|
|
|
