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Job DescriptionP75822
Confidence99.96%DateThu Jan 5 12:14:36 GMT 2012
Rank67Aligned Residues273
% Identity14%Templatec3a1nB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:ndp-sugar epimerase; PDBTitle: crystal structure of l-threonine dehydrogenase from2 hyperthermophilic archaeon thermoplasma volcanium
Resolution2.07 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20.........30.........40.........50.........60.........70.........80
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Query Sequence  ILVLGASGYIGQHLVRTLSQQGHQILAAARHVDRLAKLQLANVSCHKVDLSWPDNLPALLQDIDTVYFLVHSMGEG. . . .
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Template Sequence  ILVTGSSGQIGTELVPYLAEKYGKKNVIASDI. . . VQRDTGGIKFITLDVSNRDEIDRAVEKYSIDAIFHLAGILSAKGE
Template Known Secondary structure  TTTS
GGGS...S



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   2.......10.........20.........30... ......40.........50.........60.........70........
 
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Query Sequence  . . . GDFIAQERQVALNVRDALREVPVKQLIFLSSLQAPP. . . . . . . . . . . . . . HEQSDHLRARQATADIL. . . . REANVP
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Template Sequence  KDPALAYKVNMNGTYNILEAAKQHRVEKVVIPSTIGVFGPETPKNKVPSITITRPRTMYGVTKIAAELLGQYYYEKFGLD
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GGG

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   7980.........90.........100.........110.........120.........130.........140.........150........
 
   140.........150.. .......160.........170.........180.........190.........200 .........210
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Query Sequence  VTELRAGIIVGAG. . . . . . . SAAFEVMRDMVYNLPVLTPPRWVRSRTTPIALENLLHYLVALLDHPAS. . EHRIFEAAGP
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Template Sequence  VRSLRYPGIISYKAEPTAGTTDYAVEIFYYAVKREKYKCYLAPNRALPMMYMPDALKALVDLYEADRDKLVLRNGYNVTA
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TTTTT
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   159160.........170.........180.........190.........200.........210.........220.........230........
 
   211........220.........230.........240.........250.........260.........270........ .280.........
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Query Sequence  EVLSYQQQFEHFMAVSGKRRWLIPIPLPTRWISVWFLNVITSVPPTTARALIQGLKHDLLADDTALRA. LIPQRLIAFDD
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Template Sequence  YTFTPSELYSKIKERIPEFEIEYKEDFRDKIAAT. . . . . . . . . . . . . . . . . . . . . . WPESLDSSEASNEWGFSIEYDLDR
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T......................S
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   239240.........250.........260.........270.. .......280.........290......
 
   290.........300..
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Query Sequence  AVRSTLKEEEKLV
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Template Sequence  TIDDMIDHISEKL
Template Known Secondary structure  T
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   297..300.........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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