Job Description P75822 Confidence 99.08% Date Thu Jan 5 12:14:36 GMT 2012 Rank 236 Aligned Residues 191 % Identity 16% Template c2z1nA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:dehydrogenase; PDBTitle: crystal structure of ape0912 from aeropyrum pernix k1 Resolution 1.80 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.									.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.							.	.	.
Predicted Secondary structure																																									.	.	.	.	.	.	.	.																									.	.	.	.	.	.
Query SS confidence																																									.	.	.	.	.	.	.	.																									.	.	.	.	.	.
Query Sequence		Q	R	I	L	V	L	G	A	S	G	Y	I	G	Q	H	L	V	R	T	L	S	Q	Q	G	H	Q	I	L	A	A	A	R	H	V	D	R	L	A	K	.	.	.	.	.	.	.	.	L	Q	L	A	N	V	S	C	H	K	V	D	L	S	W	P	D	N	L	P	A	L	L	Q	.	.	.	.	.	.	D	I	D
Query Conservation																																									.	.	.	.	.	.	.	.																									.	.	.	.	.	.
Alig confidence																																									.	.	.	.	.	.	.	.																									.	.	.	.	.	.
Template Conservation
Template Sequence		K	L	A	V	V	T	A	G	S	S	G	L	G	F	A	S	A	L	E	L	A	R	N	G	A	R	L	L	L	F	S	R	N	R	E	K	L	E	A	A	A	S	R	I	A	S	L	V	S	G	A	Q	V	D	I	V	A	G	D	I	R	E	P	G	D	I	D	R	L	F	E	K	A	R	D	L	G	G	A	D
Template Known Secondary structure								T	T	T	S													T	T								S																S	T	T										T	T															T	T			S
Template Predicted Secondary structure
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		69	70	.	.	.	.	.	.	.	.	.	80															.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120			.	.	.	.	.	.	.	.	.	130	.	.
Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.																																									.	.
Query SS confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.																																									.	.
Query Sequence		T	V	Y	F	L	V	H	S	M	G	E	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	D	F	I	A	Q	E	R	Q	V	A	L	N	V	R	D	A	L	R	E	V	P	V	K	Q	L	I	F	L	S	S	L	Q	A	P	P	H	E	Q	S	.	.	D	H	L	R	A	R	Q	A	T	A	D	I
Query Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.																																									.	.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.																																									.	.
Template Conservation
Template Sequence		I	L	V	Y	S	T	G	G	P	R	P	G	R	F	M	E	L	G	V	E	D	W	D	E	S	Y	R	L	L	A	R	S	A	V	W	V	G	R	R	A	A	E	Q	M	V	E	K	G	W	G	R	M	V	Y	I	G	S	V	T	L	L	R	P	W	Q	D	L	A	L	S	N	I	M	R	L	P	V	I	G	V
Template Known Secondary structure													B		G	G	G													T																			T										G	G	G	T	S			T	T	B							T
Template Predicted Secondary structure
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		133	.								.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.			.	.
Predicted Secondary structure				.	.	.	.	.	.	.																																																																				.	.
Query SS confidence				.	.	.	.	.	.	.																																																																				.	.
Query Sequence		L	R	.	.	.	.	.	.	.	E	A	N	V	P	V	T	E	L	R	A	G	I	I	V	G	A	G	S	A	A	F	E	V	M	R	D	M	V	Y	N	L	P	V	L	T	P	P	R	W	V	R	S	R	T	T	P	I	A	L	E	N	L	L	H	Y	L	V	A	L	L	D	H	P	A	S	E	.	.	H	R
Query Conservation				.	.	.	.	.	.	.																																																																				.	.
Alig confidence				.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.
Template Conservation																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	R	T	L	A	L	E	L	A	P	H	G	V	T	V	N	A	V	L	P	S	L	I	L	T	D	R	V	R	R	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	M	G	R	V	G	K	P	E	E	L	A	S	V	V	A	F	L	A	S	E	K	A	S	F	I	T	G	A
Template Known Secondary structure										G	G	G	T																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	S	S															T	S	G	G	G	T	T			S
Template Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.																					.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
		204	.	.	.	.	.	210	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	F	E	A	A	G	P	E	V	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	I	P	V	D	G	G	A	H	I
Template Known Secondary structure						S	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		251	.	.	.	.	.	.	.	.	260

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions