Job Description P75822 Confidence 100.00% Date Thu Jan 5 12:14:36 GMT 2012 Rank 22 Aligned Residues 292 % Identity 14% Template c2z1mC_ PDB info PDB header:lyase Chain: C: PDB Molecule:gdp-d-mannose dehydratase; PDBTitle: crystal structure of gdp-d-mannose dehydratase from aquifex aeolicus2 vf5 Resolution 2.00 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																																																																																.	.
Query SS confidence																																																																																.	.
Query Sequence		Q	R	I	L	V	L	G	A	S	G	Y	I	G	Q	H	L	V	R	T	L	S	Q	Q	G	H	Q	I	L	A	A	A	R	H	V	D	R	L	A	K	L	Q	L	A	N	V	S	C	H	K	V	D	L	S	W	P	D	N	L	P	A	L	L	Q	D	I	D	T	V	Y	F	L	V	H	S	M	G	E	G	.	.
Query Conservation																																																																																.	.
Alig confidence																																												.																																				.	.
Template Conservation																																												.
Template Sequence		K	R	A	L	I	T	G	I	R	G	Q	D	G	A	Y	L	A	K	L	L	L	E	K	G	Y	E	V	Y	G	A	D	S	W	R	L	K	E	L	G	I	E	N	.	D	V	K	I	I	H	M	D	L	L	E	F	S	N	I	I	R	T	I	E	K	V	Q	P	D	E	V	Y	N	L	A	A	Q	S	F	V	G
Template Known Secondary structure								T	T	T	S													T	T														T	T		T	T	.	T	S							T	T															S
Template Predicted Secondary structure																																												.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.		.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
									81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.														.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.					.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.
Query SS confidence		.	.	.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.
Query Sequence		.	.	.	.	.	.	.	G	D	F	I	A	Q	E	R	Q	V	A	L	N	V	R	D	A	L	R	E	V	P	V	K	Q	L	I	F	L	S	S	L	Q	A	P	P	.	.	.	.	.	.	.	.	.	.	.	.	.	H	E	Q	S	D	H	L	R	A	R	Q	A	T	A	D	I	L	.	.	.	.	R	E	A
Query Conservation		.	.	.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.
Alig confidence		.	.	.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.
Template Conservation
Template Sequence		V	S	F	E	Q	P	I	L	T	A	E	V	D	A	I	G	V	L	R	I	L	E	A	L	R	T	V	K	P	D	T	K	F	Y	Q	A	S	T	S	E	M	F	G	K	V	Q	E	I	P	Q	T	E	K	T	P	F	Y	P	R	S	P	Y	A	V	A	K	L	F	G	H	W	I	T	V	N	Y	R	E	A	Y
Template Known Secondary structure						S									T															T	T									G	G	G	T		S		S	S	S	S	B		T	T	S						S
Template Predicted Secondary structure
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.								.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.
Query Sequence		N	V	P	V	T	E	L	R	A	G	I	I	V	G	A	G	S	A	.	.	.	.	.	.	.	A	F	E	V	M	R	D	M	V	Y	N	L	P	V	L	T	P	P	R	W	V	R	S	R	T	T	P	I	A	L	E	N	L	L	H	Y	L	V	A	L	L	D	H	P	A	S	E	H	R	I	F	E	A	A	G
Query Conservation																				.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.																																														.	.
Template Conservation																																																																								.	.
Template Sequence		N	M	F	A	C	S	G	I	L	F	N	H	E	S	P	L	R	G	I	E	F	V	T	R	K	I	T	Y	S	L	A	R	I	K	Y	G	L	Q	D	K	L	V	L	G	N	L	N	A	K	R	D	W	G	Y	A	P	E	Y	V	E	A	M	W	L	M	M	Q	Q	P	E	.	.	P	D	D	Y	V	I	A	T
Template Known Secondary structure																T	T	S		T	T	S														T	T	S		S					S		T	T																				T	S	S	S	.	.							S
Template Predicted Secondary structure																																																																								.	.
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.			240	.	.	.	.	.	.	.
		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.		.	280	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																							.
Query SS confidence																																																																							.
Query Sequence		P	E	V	L	S	Y	Q	Q	Q	F	E	H	F	M	A	V	S	G	K	R	R	W	L	I	P	I	P	L	P	T	R	W	I	S	V	W	F	L	N	V	I	T	S	V	P	P	T	T	A	R	A	L	I	Q	G	L	K	H	D	L	L	A	D	D	T	A	L	R	A	.	L	I	P	Q	R	L	I	A	F	D
Query Conservation																																																																							.
Alig confidence																																																				.	.	.																	.
Template Conservation																																																				.	.	.
Template Sequence		G	E	T	H	T	V	R	E	F	V	E	K	A	A	K	I	A	G	F	D	I	E	W	V	G	E	G	I	N	E	K	G	I	D	R	N	T	G	K	V	I	V	E	V	S	E	E	F	F	R	.	.	.	P	A	E	V	D	I	L	V	G	N	P	E	K	A	M	K	K	L	G	W	K	P	R	T	T	F	D
Template Known Secondary structure		S																	T							S	S	G	G	G						T	T	T									T	T	T			.	.	.				S					B															S
Template Predicted Secondary structure																																																				.	.	.
Template SS confidence
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.				.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
		289	290	.	.	.	.	.	.	.	.	.	300
Predicted Secondary structure
Query SS confidence
Query Sequence		D	A	V	R	S	T	L	K	E	E	E	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	L	V	E	I	M	M	E	A	D	L	K
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		325	.	.	.	.	330	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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