Job Description P75822 Confidence 100.00% Date Thu Jan 5 12:14:36 GMT 2012 Rank 21 Aligned Residues 275 % Identity 18% Template c2x4gA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:nucleoside-diphosphate-sugar epimerase; PDBTitle: crystal structure of pa4631, a nucleoside-diphosphate-sugar2 epimerase from pseudomonas aeruginosa Resolution 2.65 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	Q	R	I	L	V	L	G	A	S	G	Y	I	G	Q	H	L	V	R	T	L	S	Q	Q	G	H	Q	I	L	A	A	A	R	H	V	D	R	L	A	K	L	Q	L	A	N	V	S	C	H	K	V	D	L	S	W	P	D	N	L	P	A	L	L	Q	D	I	D	T	V	Y	F	L	V	H	S	M	G	E	G	G
Query Conservation
Alig confidence																																																																													.	.	.	.	.
Template Conservation																																																																													.	.	.	.	.
Template Sequence		H	V	K	Y	A	V	L	G	A	T	G	L	L	G	H	H	A	A	R	A	I	R	A	A	G	H	D	L	V	L	I	H	R	P	S	S	Q	I	Q	R	L	A	Y	L	E	P	E	C	R	V	A	E	M	L	D	H	A	G	L	E	R	A	L	R	G	L	D	G	V	I	F	S	E	E	V	.	.	.	.	.
Template Known Secondary structure									S	T	T	S													T	T									T	T	S		G	G	G	G	G	G	G									T	T									T	T	T		S									.	.	.	.	.
Template Predicted Secondary structure																																																																													.	.	.	.	.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.																			.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.				.	.	.	.	.	.	140
Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.
Query SS confidence																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.
Query Sequence		D	F	I	A	Q	E	R	Q	V	A	L	N	V	R	D	A	L	R	E	V	P	V	K	Q	L	I	F	L	S	S	L	Q	A	P	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	E	Q	S	D	H	L	R	A	R	Q	A	T	A	D	I	L	.	.	.	R	E	A	N	V	P	V
Query Conservation																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.
Alig confidence		.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.
Template Conservation		.	.	.
Template Sequence		.	.	.	A	S	A	L	G	Q	T	N	P	F	Y	A	A	C	L	Q	A	R	V	P	R	I	L	Y	V	G	S	A	Y	A	M	P	R	H	P	Q	G	L	P	G	H	E	G	L	F	Y	D	S	L	P	S	G	K	S	S	Y	V	L	C	K	W	A	L	D	E	Q	A	R	E	Q	A	R	N	G	L	P	V
Template Known Secondary structure		.	.	.																		T		S								G	G	G	S				T	T	S	S		B		T	T				S	S			T	T	S																				T	T
Template Predicted Secondary structure		.	.	.
Template SS confidence
					99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure
Query SS confidence
Query Sequence		T	E	L	R	A	G	I	I	V	G	A	G	S	A	A	F	E	V	M	R	D	M	V	Y	N	L	P	V	L	T	P	P	R	W	V	R	S	R	T	T	P	I	A	L	E	N	L	L	H	Y	L	V	A	L	L	D	H	P	A	S	E	H	R	I	F	E	A	A	G	P	E	V	L	S	Y	Q	Q	Q	F	E
Query Conservation
Alig confidence																												.																																		.									.
Template Conservation																												.																																		.									.
Template Sequence		V	I	G	I	P	G	M	V	L	G	E	L	D	I	G	P	T	T	G	R	V	I	T	A	I	G	.	N	G	E	M	T	H	Y	V	A	G	Q	R	N	V	I	D	A	A	E	A	G	R	G	L	L	M	A	L	E	R	G	R	I	.	G	E	R	Y	L	L	T	G	.	H	N	L	E	M	A	D	L	T	R
Template Known Secondary structure												S			S	S		S	T	T								.	T	T																													S		T	.	T								.
Template Predicted Secondary structure																												.																																		.									.
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.		.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.		.	.	.	.	.	240	.	.		.	.	.	.	.	.	.	250	.	.
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.		.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																												.
Query SS confidence																																																												.
Query Sequence		H	F	M	A	V	S	G	K	R	R	W	L	I	P	I	P	L	P	T	R	W	I	S	V	W	F	L	N	V	I	T	S	V	P	P	T	T	A	R	A	L	I	Q	G	L	K	H	D	L	L	A	D	D	T	A	L	R	A	.	L	I	P	Q	R	L	I	A	F	D	D	A	V	R	S	T	L	K	E	E	E
Query Conservation																																																												.
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.
Template Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	I	A	E	L	L	G	Q	P	A	P	Q	P	M	S	M	A	M	A	R	A	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	T	L	G	R	L	E	V	M	A	G	G	Q	F	L	D	G	R	K	A	R	E	E	L	G	F	F	S	T	T	A	L	D	D	T	L	L	R	A	I	D	W	F	R
Template Known Secondary structure								T																.	.	.	.	.	.	.	.	.	.	.	.	.	.									T	T					B															S
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.															.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
		300	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	N
Template Known Secondary structure			T
Template Predicted Secondary structure
Template SS confidence
		335	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions