Job Description P75822 Confidence 99.04% Date Thu Jan 5 12:14:36 GMT 2012 Rank 257 Aligned Residues 187 % Identity 18% Template c2qq5A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:dehydrogenase/reductase sdr family member 1; PDBTitle: crystal structure of human sdr family member 1 Resolution 1.80 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.							.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.									.	.	.
Predicted Secondary structure																																											.	.	.	.	.	.																							.	.	.	.	.	.	.	.
Query SS confidence																																											.	.	.	.	.	.																							.	.	.	.	.	.	.	.
Query Sequence		Q	R	I	L	V	L	G	A	S	G	Y	I	G	Q	H	L	V	R	T	L	S	Q	Q	G	H	Q	I	L	A	A	A	R	H	V	D	R	L	A	K	L	Q	.	.	.	.	.	.	L	A	N	V	S	C	H	K	V	D	L	S	W	P	D	N	L	P	A	L	L	Q	.	.	.	.	.	.	.	.	D	I	D
Query Conservation																																											.	.	.	.	.	.																							.	.	.	.	.	.	.	.
Alig confidence																																											.	.	.	.	.	.																							.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	V	C	V	V	T	G	A	S	R	G	I	G	R	G	I	A	L	Q	L	C	K	A	G	A	T	V	Y	I	T	G	R	H	L	D	T	L	R	V	V	A	Q	E	A	Q	S	L	G	G	Q	C	V	P	V	V	C	D	S	S	Q	E	S	E	V	R	S	L	F	E	Q	V	D	R	E	Q	Q	G	R	L	D
Template Known Secondary structure							S	S	T	T	S													T	T								S																S	S									T	T	S																T	T
Template Predicted Secondary structure
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		69	70	.	.	.	.	.	.	.	.	.	80																							.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	V	Y	F	L	V	H	S	M	G	E	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	D	F	I	A	Q	E	R	Q	V	A	L	N	V	R	D	A	L	R	E	V	P	V	K	Q	L	I	F	L	S	S	L	Q	A	P	P	H	E	Q	S	D	H	L	R	A	R
Query Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	L	V	N	N	A	Y	A	G	V	Q	T	I	L	N	T	R	N	K	A	F	W	E	T	P	A	S	M	W	D	D	I	N	N	V	G	L	R	G	H	Y	F	C	S	V	Y	G	A	R	L	M	V	P	A	G	Q	G	L	I	V	V	I	S	S	P	G	S	L	Q	Y	M	F	N	V	P	Y	G	V	G	K
Template Known Secondary structure									T	T							T	T	T			T	T	T	S		T	T							T	T	T	T															G	G	G	T										G	G	G	T	S			S	S
Template Predicted Secondary structure
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		127	.	.	130	.	.	.	.								.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.		.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure										.	.	.	.	.	.	.																																	.
Query SS confidence										.	.	.	.	.	.	.																																	.
Query Sequence		Q	A	T	A	D	I	L	R	.	.	.	.	.	.	.	E	A	N	V	P	V	T	E	L	R	A	G	I	I	V	G	A	G	S	A	A	F	E	V	M	R	D	M	V	Y	N	L	.	P	V	L	T	P	P	R	W	V	R	S	R	T	T	P	I	A	L	E	N	L	L	H
Query Conservation										.	.	.	.	.	.	.																																	.
Alig confidence										.	.	.	.	.	.	.																																	.
Template Conservation
Template Sequence		A	A	C	D	K	L	A	A	D	C	A	H	E	L	R	R	H	G	V	S	C	V	S	L	W	P	G	I	V	Q	T	E	L	L	S	S	A	E	T	T	E	L	S	G	K	C	V	V	A	L	A	T	D	P	N	I	L	S	L	S	G	K	V	L	P	S	C	D	L	A	R
Template Known Secondary structure																G	G	G	T											S		T	T	T																			T		T	T	G	G	G	G	T	T
Template Predicted Secondary structure
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions