Job Description P75822 Confidence 98.95% Date Thu Jan 5 12:14:36 GMT 2012 Rank 276 Aligned Residues 204 % Identity 14% Template c2qhxB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:pteridine reductase 1; PDBTitle: structure of pteridine reductase from leishmania major2 complexed with a ligand Resolution 2.61 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.									.	.	.	.	.	.	.	.	50	.	.	.	.	.	.
Predicted Secondary structure																																											.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																											.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	P	Q	R	I	L	V	L	G	A	S	G	Y	I	G	Q	H	L	V	R	T	L	S	Q	Q	G	H	Q	I	L	A	A	A	R	H	V	D	R	L	A	K	.	.	.	.	.	.	.	.	L	Q	L	A	N	V	S	C	H	K	V	D	L	S	W	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																											.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.																																							.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation				.
Template Sequence		V	P	.	V	A	L	V	T	G	A	A	K	R	L	G	R	S	I	A	E	G	L	H	A	E	G	Y	A	V	C	L	H	Y	H	R	S	A	A	E	A	N	A	L	S	A	T	L	N	A	R	R	P	N	S	A	I	T	V	Q	A	D	L	S	N	V	A	T	A	P	S	A	P	V	T	L	F	T	R	C	A
Template Known Secondary structure				.					T	T		S	S												T	T	T								S	S																S	T	T										S	S	S		B						B
Template Predicted Secondary structure				.
Template SS confidence
		6	.		.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
				57	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100																						.	.	.	.	.	.	.	.	.	110	.	.	.
Predicted Secondary structure		.	.																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	P	D	N	L	P	A	L	L	Q	D	I	D	T	V	Y	F	L	V	H	S	M	G	E	G	G	D	F	I	A	Q	E	R	Q	V	A	L	N	V	R	D	A	L	R	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	P	V	K	Q	L	I	F	L	S	S	L	Q
Query Conservation		.	.																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	L	V	A	A	C	Y	T	H	W	G	R	C	D	V	L	V	N	N	A	S	S	F	Y	P	T	P	L	L	R	E	A	M	E	T	A	T	A	D	L	F	G	S	N	A	I	A	P	Y	F	L	I	K	A	F	A	H	R	V	A	G	T	P	A	K	H	R	G	T	N	Y	S	I	I	N	M	V	D	A	M
Template Known Secondary structure												S																	S																	T																	S		G	G	G	S		S										T	T
Template Predicted Secondary structure
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
		114	.	.	.	.	.	120			.	.	.	.	.	.	.	.	.	130	.	.								.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
Predicted Secondary structure									.	.													.	.	.	.	.	.	.
Query SS confidence									.	.													.	.	.	.	.	.	.
Query Sequence		A	P	P	H	E	Q	S	.	.	D	H	L	R	A	R	Q	A	T	A	D	I	.	.	.	.	.	.	.	L	R	E	A	N	V	P	V	T	E	L	R	A	G	I	I	V	G	A	G	S	A	A	F	E	V	M	R	D	M	V	Y	N	L	P	V	L	T	P	P	R	W	V	R	S	R	T	T	P	I	A	L
Query Conservation									.	.													.	.	.	.	.	.	.
Alig confidence									.	.													.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.
Template Conservation																																																																	.	.	.	.	.	.	.	.	.
Template Sequence		T	N	Q	P	L	L	G	Y	T	I	Y	T	M	A	K	G	A	L	E	G	L	T	R	S	A	A	L	E	L	A	P	L	Q	I	R	V	N	G	V	G	P	G	L	S	V	L	V	D	D	M	P	P	A	V	W	E	G	H	R	S	K	V	P	.	.	.	.	.	.	.	.	.	L	Y	Q	R	D	S	S	A
Template Known Secondary structure		T	T	S			T	T																							G	G	G	T									S	S	B	S					S										T	T	S	T	.	.	.	.	.	.	.	.	.	T	T	T	S		B
Template Predicted Secondary structure																																																																	.	.	.	.	.	.	.	.	.
Template SS confidence
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.										.	.	.	250	.	.	.	.
		185	.	.	.	.	190	.	.	.	.	.			.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure													.	.
Query SS confidence													.	.
Query Sequence		E	N	L	L	H	Y	L	V	A	L	L	.	.	D	H	P	A	S	E	H	R	I	F	E	A	A	G	P	E	V	L	S
Query Conservation													.	.
Alig confidence													.	.
Template Conservation
Template Sequence		A	E	V	S	D	V	V	I	F	L	C	S	S	K	A	K	Y	I	T	G	T	C	V	K	V	D	G	G	Y	S	L	T
Template Known Secondary structure													S	G	G	G	T	T			S						S	T	T	G	G	G
Template Predicted Secondary structure
Template SS confidence
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions