Job Description P75822 Confidence 99.98% Date Thu Jan 5 12:14:36 GMT 2012 Rank 47 Aligned Residues 271 % Identity 14% Template c2pk3B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:gdp-6-deoxy-d-lyxo-4-hexulose reductase; PDBTitle: crystal structure of a gdp-4-keto-6-deoxy-d-mannose reductase Resolution 1.82 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.			.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																																																																		.	.
Query SS confidence																																																																		.	.
Query Sequence		Q	R	I	L	V	L	G	A	S	G	Y	I	G	Q	H	L	V	R	T	L	S	Q	Q	G	H	Q	I	L	A	A	A	R	H	V	D	R	L	A	K	L	Q	L	A	N	V	S	C	H	K	V	D	L	S	W	P	D	N	L	P	A	L	L	Q	D	.	.	I	D	T	V	Y	F	L	V	H	S	M	G	E	G
Query Conservation																																																																		.	.
Alig confidence																																						.	.	.	.																									.	.
Template Conservation																																						.	.	.	.
Template Sequence		M	R	A	L	I	T	G	V	A	G	F	V	G	K	Y	L	A	N	H	L	T	E	Q	N	V	E	V	F	G	T	S	R	N	N	E	A	.	.	.	.	K	L	P	N	V	E	M	I	S	L	D	I	M	D	S	Q	R	V	K	K	V	I	S	D	I	K	P	D	Y	I	F	H	L	A	A	K	S	S	V	K
Template Known Secondary structure								T	T	T	S												T	T	T								S		T	T		.	.	.	.			T	T								T	T															S							S
Template Predicted Secondary structure																																						.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.					.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
									81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.																.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.					.
Predicted Secondary structure		.	.	.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.
Query SS confidence		.	.	.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.
Query Sequence		.	.	.	.	.	.	.	G	D	F	I	A	Q	E	R	Q	V	A	L	N	V	R	D	A	L	R	E	V	P	V	K	Q	L	I	F	L	S	S	L	Q	A	P	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	E	Q	S	D	H	L	R	A	R	Q	A	T	A	D	I	L	.	.	.	.	R
Query Conservation		.	.	.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.
Alig confidence		.	.	.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.
Template Conservation
Template Sequence		D	S	W	L	N	K	K	G	T	F	S	T	N	V	F	G	T	L	H	V	L	D	A	V	R	D	S	N	L	D	C	R	I	L	T	I	G	S	S	E	E	Y	G	M	I	L	P	E	E	S	P	V	S	E	E	N	Q	L	R	P	M	S	P	Y	G	V	S	K	A	S	V	G	M	L	A	R	Q	Y	V	K
Template Known Secondary structure				T	T																								T											G	G	G	T	B	S			G	G	G		S	B		T	T	S			B			S
Template Predicted Secondary structure
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.									.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.
Query Sequence		E	A	N	V	P	V	T	E	L	R	A	G	I	I	V	G	A	G	S	A	.	.	.	.	.	.	.	.	A	F	E	V	M	R	D	M	V	Y	N	L	P	V	L	T	P	P	R	W	V	R	S	R	T	T	P	I	A	L	E	N	L	L	H	Y	L	V	A	L	L	D	H	P	A	S	E	H	R	I	F	E
Query Conservation																						.	.	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.	.																																															.
Template Conservation																																																																												.
Template Sequence		A	Y	G	M	D	I	I	H	T	R	T	F	N	H	I	G	P	G	Q	S	L	G	F	V	T	Q	D	F	A	K	Q	I	V	D	I	E	M	E	K	Q	E	P	I	I	K	V	G	N	L	E	A	V	R	D	F	T	D	V	R	D	I	V	Q	A	Y	W	L	L	S	Q	Y	G	K	T	.	G	D	V	Y	N
Template Known Secondary structure																		T	T			S	S	S														T	T	S	S		S							S	S																								T	.	T
Template Predicted Secondary structure																																																																												.
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230		.	.	.	.	.
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.		.	280	.	.	.	.	.
Predicted Secondary structure																																																																										.
Query SS confidence																																																																										.
Query Sequence		A	A	G	P	E	V	L	S	Y	Q	Q	Q	F	E	H	F	M	A	V	S	G	K	R	R	W	L	I	P	I	P	L	P	T	R	W	I	S	V	W	F	L	N	V	I	T	S	V	P	P	T	T	A	R	A	L	I	Q	G	L	K	H	D	L	L	A	D	D	T	A	L	R	A	.	L	I	P	Q	R	L	I
Query Conservation																																																																										.
Alig confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Template Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	C	S	G	I	G	T	R	I	Q	D	V	L	D	L	L	L	A	M	A	N	V	K	I	D	T	E	L	N	P	L	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	R	P	S	E	V	P	T	L	I	G	S	N	K	R	L	K	D	S	T	G	W	K	P	R	I
Template Known Secondary structure			S		S																S	S	S								G	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			S	S			S	B			B															S
Template Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.																							.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
		286	.	.	.	290	.	.	.	.	.	.	.	.	.	300
Predicted Secondary structure
Query SS confidence
Query Sequence		A	F	D	D	A	V	R	S	T	L	K	E	E	E	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	L	E	K	S	L	F	E	I	L	Q	S	Y	R	Q
Template Known Secondary structure																T
Template Predicted Secondary structure
Template SS confidence
		294	.	.	.	.	.	300	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions