Job Description P75822 Confidence 99.30% Date Thu Jan 5 12:14:36 GMT 2012 Rank 135 Aligned Residues 191 % Identity 13% Template c2nm0B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:probable 3-oxacyl-(acyl-carrier-protein) reductase; PDBTitle: crystal structure of sco1815: a beta-ketoacyl-acyl carrier protein2 reductase from streptomyces coelicolor a3(2) Resolution 1.99 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.								.	.	.	.	70	.	.	.
Predicted Secondary structure																																																																			.	.	.	.	.	.	.
Query SS confidence																																																																			.	.	.	.	.	.	.
Query Sequence		M	P	Q	R	I	L	V	L	G	A	S	G	Y	I	G	Q	H	L	V	R	T	L	S	Q	Q	G	H	Q	I	L	A	A	A	R	H	V	D	R	L	A	K	L	Q	L	A	N	V	S	C	H	K	V	D	L	S	W	P	D	N	L	P	A	L	L	Q	.	.	.	.	.	.	.	D	I	D	T	V	Y	F	L
Query Conservation																																																																			.	.	.	.	.	.	.
Alig confidence																																											.	.	.	.	.																				.	.	.	.	.	.	.
Template Conservation																																											.	.	.	.	.
Template Sequence		M	S	R	S	V	L	V	T	G	G	N	R	G	I	G	L	A	I	A	R	A	F	A	D	A	G	D	K	V	A	I	T	Y	R	S	G	E	P	P	E	G	.	.	.	.	.	F	L	A	V	K	C	D	I	T	D	T	E	Q	V	E	Q	A	Y	K	E	I	E	E	T	H	G	P	V	E	V	L	I	A	N
Template Known Secondary structure										T		S	S													T	T								S	S	S				T	T	.	.	.	.	.	S							T	T	S																	S		S
Template Predicted Secondary structure																																											.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.						.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		74	.	.	.	.	.	80												.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.			.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.																																										.	.																.	.	.	.
Query SS confidence									.	.	.	.	.	.	.	.	.	.	.																																										.	.																.	.	.	.
Query Sequence		V	H	S	M	G	E	G	.	.	.	.	.	.	.	.	.	.	.	G	D	F	I	A	Q	E	R	Q	V	A	L	N	V	R	D	A	L	R	E	V	P	V	K	Q	L	I	F	L	S	S	L	Q	A	P	P	H	E	Q	S	D	.	.	H	L	R	A	R	Q	A	T	A	D	I	L	R	E	A	.	.	.	.
Query Conservation									.	.	.	.	.	.	.	.	.	.	.																																										.	.																.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.																																										.	.																.	.	.	.
Template Conservation
Template Sequence		A	G	V	T	K	D	Q	L	M	S	E	E	D	F	T	S	V	V	E	T	N	L	T	G	T	F	R	V	V	K	R	A	N	R	A	M	L	R	A	K	K	G	R	V	V	L	I	S	S	V	V	G	L	L	G	S	A	G	Q	A	N	Y	A	A	S	K	A	G	L	V	G	F	A	R	S	L	A	R	E	L
Template Known Secondary structure			S			T	T	T																																	T
Template Predicted Secondary structure
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
					137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.			.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
Predicted Secondary structure		.	.	.																																																												.	.
Query SS confidence		.	.	.																																																												.	.
Query Sequence		.	.	.	N	V	P	V	T	E	L	R	A	G	I	I	V	G	A	G	S	A	A	F	E	V	M	R	D	M	V	Y	N	L	P	V	L	T	P	P	R	W	V	R	S	R	T	T	P	I	A	L	E	N	L	L	H	Y	L	V	A	L	L	.	.	D	H	P	A	S	E	H	R	I	F	E	A	A	G	P	E
Query Conservation		.	.	.																																																												.	.
Alig confidence		.	.	.																.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.																	.	.
Template Conservation																				.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.
Template Sequence		G	S	R	N	I	T	F	N	V	V	A	P	G	F	V	D	T	Q	.	.	.	.	.	.	.	R	A	N	I	V	S	Q	V	P	L	G	.	.	.	.	.	.	.	.	.	.	R	Y	A	R	P	E	E	I	A	A	T	V	R	F	L	A	S	D	D	A	S	Y	I	T	G	A	V	I	P	V	D	G	G	L
Template Known Secondary structure			S	S	S										S	B				.	.	.	.	.	.	.					G	G	G	S	T	T		.	.	.	.	.	.	.	.	.	.	S		B													T	S	G	G	G	T	T			S						S	T	T	T
Template Predicted Secondary structure																				.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.								.	.	.	180	.	.	.	.	.	.	.											.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
		212	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	M
Template Known Secondary structure		T
Template Predicted Secondary structure
Template SS confidence
		231	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions