Job Description P75822 Confidence 97.17% Date Thu Jan 5 12:14:36 GMT 2012 Rank 488 Aligned Residues 103 % Identity 13% Template c2ldxA_ PDB info PDB header:oxidoreductase(choh(d)-nad(a)) Chain: A: PDB Molecule:apo-lactate dehydrogenase; PDBTitle: characterization of the antigenic sites on the refined 3-2 angstroms resolution structure of mouse testicular lactate3 dehydrogenase c4 Resolution 2.96 Å

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		1	.		.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.			.	.	30	.	.	.	.	.	.	.	.	.	40	.											.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
Predicted Secondary structure				.																										.	.															.	.	.	.	.	.	.	.	.	.
Query SS confidence				.																										.	.															.	.	.	.	.	.	.	.	.	.
Query Sequence		M	P	.	Q	R	I	L	V	L	G	A	S	G	Y	I	G	Q	H	L	V	R	T	L	S	Q	Q	G	H	.	.	Q	I	L	A	A	A	R	H	V	D	R	L	A	K	.	.	.	.	.	.	.	.	.	.	L	Q	L	A	N	V	S	C	H	K	V	D	L	S	W	P	D	N	L	P	A	L	L	Q	D	I
Query Conservation				.																										.	.															.	.	.	.	.	.	.	.	.	.
Alig confidence				.									.																	.	.															.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.
Template Conservation													.																																																								.	.	.	.	.	.	.
Template Sequence		L	S	R	C	K	I	T	V	V	G	V	.	G	D	V	G	M	A	C	A	I	S	I	L	L	K	G	L	A	D	E	L	A	L	V	D	A	D	T	D	K	L	R	G	E	A	L	D	L	Q	H	G	S	L	F	L	S	T	P	K	I	V	F	G	K	D	Y	.	.	.	.	.	.	.	N	V	S	A	N	S
Template Known Secondary structure													.	S												T	T	T	S		S							S															T	T	T	T		S								S	S	G	.	.	.	.	.	.	.	G	G	G	T	T
Template Predicted Secondary structure													.																																																								.	.	.	.	.	.	.
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.		.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.								.	.	.	.	.	.
		68	.	70	.	.	.	.	.	.	.	.	.	80	.					.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
Predicted Secondary structure																.	.	.	.
Query SS confidence																.	.	.	.
Query Sequence		D	T	V	Y	F	L	V	H	S	M	G	E	G	G	.	.	.	.	D	F	I	A	Q	E	R	Q	V	A	L	N	V	R	D	A	L	R	E	V	P	V	K	Q	L	I	F	L	S	S
Query Conservation																.	.	.	.
Alig confidence																.	.	.	.
Template Conservation
Template Sequence		K	L	V	I	I	T	A	G	A	R	M	V	S	G	Q	T	R	L	D	L	L	Q	R	N	V	A	I	M	K	A	I	V	P	G	V	I	Q	N	S	P	D	C	K	I	I	V	V	T
Template Known Secondary structure									S					T	T	T		S	S		T	T											T	T	T					S	T	T							S
Template Predicted Secondary structure
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions