Job Description P75822 Confidence 99.96% Date Thu Jan 5 12:14:36 GMT 2012 Rank 74 Aligned Residues 248 % Identity 16% Template c2ggsB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:273aa long hypothetical dtdp-4-dehydrorhamnose PDBTitle: crystal structure of hypothetical dtdp-4-dehydrorhamnose2 reductase from sulfolobus tokodaii Resolution 1.70 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.			.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																																																																	.	.
Query SS confidence																																																																	.	.
Query Sequence		Q	R	I	L	V	L	G	A	S	G	Y	I	G	Q	H	L	V	R	T	L	S	Q	Q	G	H	Q	I	L	A	A	A	R	H	V	D	R	L	A	K	L	Q	L	A	N	V	S	C	H	K	V	D	L	S	W	P	D	N	L	P	A	L	L	Q	.	.	D	I	D	T	V	Y	F	L	V	H	S	M	G	E	G
Query Conservation																																																																	.	.
Alig confidence																																			.	.	.	.	.	.	.	.	.																						.	.
Template Conservation																																			.	.	.	.	.	.	.	.	.
Template Sequence		M	R	T	L	I	T	G	A	S	G	Q	L	G	I	E	L	S	R	L	L	S	E	R	H	E	V	I	K	V	Y	N	S	S	.	.	.	.	.	.	.	.	.	E	I	Q	G	G	Y	K	L	D	L	T	D	F	P	R	L	E	D	F	I	I	K	K	R	P	D	V	I	I	N	A	A	A	M	T	D	V	D
Template Known Secondary structure								S	T	T	S											T	T	T	S							S	S	S	.	.	.	.	.	.	.	.	.			S	S	B					T	T															S
Template Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.										.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
								81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.												.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure		.	.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	G	D	F	I	A	Q	E	R	Q	V	A	L	N	V	R	D	A	L	R	E	V	P	V	K	Q	L	I	F	L	S	S	L	Q	A	P	P	.	.	.	.	.	.	.	.	.	.	.	H	E	Q	S	D	H	L	R	A	R	Q	A	T	A	D	I	L	R	E	A	N	V	P	V	T	E	L
Query Conservation		.	.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.																		.	.
Template Conservation																																																																								.	.
Template Sequence		K	C	E	I	E	K	E	K	A	Y	K	I	N	A	E	A	V	R	H	I	V	R	A	G	K	V	I	D	S	Y	I	V	H	I	S	T	D	Y	V	F	D	G	E	K	G	N	Y	K	E	E	D	I	P	N	P	I	N	Y	Y	G	L	S	K	L	L	G	E	T	F	A	.	.	L	Q	D	D	S	L	I	I
Template Known Secondary structure															T													T	T									G	G	G	S		S	S	S		S	B		T	T	S					S	S														.	.			T	T
Template Predicted Secondary structure																																																																								.	.
Template SS confidence
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.			.	.	.	.	.	.	.	.
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	A	G	I	I	V	G	A	G	S	A	A	F	E	V	M	R	D	M	V	Y	N	L	P	V	L	T	P	P	R	W	V	R	S	R	T	T	P	I	A	L	E	N	L	L	H	Y	L	V	A	L	L	D	H	P	A	S	E	H	R	I	F	E	A	A	G	P	E	V	L	S	Y	Q	Q	Q	F	E	H	F	M
Query Conservation
Alig confidence																														.	.	.	.																									.	.									.
Template Conservation																														.	.	.	.																									.	.									.
Template Sequence		R	T	S	G	I	F	R	N	K	G	F	P	I	Y	V	Y	K	T	L	K	E	G	K	T	V	F	A	F	.	.	.	.	K	G	Y	Y	S	P	I	S	A	R	K	L	A	S	A	I	L	E	L	L	E	L	R	K	.	.	T	G	I	I	H	V	A	G	.	E	R	I	S	R	F	E	L	A	L	K	I	K
Template Known Secondary structure								S	S	S	S										T	T	T							.	.	.	.	S																					T	T		.	.									.
Template Predicted Secondary structure																														.	.	.	.																									.	.									.
Template SS confidence
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.					.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.			.	.	.	.	.	.	.	.		210	.	.	.	.	.	.	.	.	.	220	.	.
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	S	G	K	R	R	W	L	I	P	I	P	L	P	T	R	W	I	S	V	W	F	L	N	V	I	T	S	V	P	P	T	T	A	R	A	L	I	Q	G	L	K	H	D	L	L	A	D	D	T	A	L	R	A	L	I	P	Q	R	L	I	A	F	D
Query Conservation
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	K	F	N	L	P	G	E	V	K	E	V	D	E	V	R	G	W	I	A	K	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	Y	D	S	S	L	D	S	S	R	A	R	K	I	L	S	T	D	F	Y	T	L	D
Template Known Secondary structure														S	S		T	T			S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	B			B											S			S	S
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.																					.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions