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Job DescriptionP75822
Confidence99.37%DateThu Jan 5 12:14:36 GMT 2012
Rank113Aligned Residues196
% Identity15%Templatec2dteB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:glucose 1-dehydrogenase related protein; PDBTitle: structure of thermoplasma acidophilum aldohexose dehydrogenase (aldt)2 in complex with nadh
Resolution1.65 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60..... ....70.....
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Query Sequence  QRILVLGASGYIGQHLVRTLSQQGHQILAAARHVDRLAKLQLANVSCHKVDLSWPDNLPALLQ. . . . . . . DIDTVYFLVH
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Template Sequence  KVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPGEAK. . . . . YDHIECDVTNPDQVKASIDHIFKEYGSISVLVNNAG
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   8.10.........20.........30.........40...... ...50.........60.........70.........80..
 
   76...80 .........90.........100.........110.........120 .........130......
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Query Sequence  SMGEG. . . . . . . . . . . . . . GDFIAQERQVALNVRDALREVPVKQLIFLSSLQAPPHEQS. . DHLRARQATADILREA. . .
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Template Sequence  IESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQASIITKNASAYVTSKHAVIGLTKSIALD
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B
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TTB
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   83......90.........100.........110.........120.........130.........140.........150.........160..
 
   137..140.........150.. .......160.........170.........180.........190..... ...
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Query Sequence  . . . NVPVTELRAGIIVGAG. . . . . . . . . . . . . SAAFEVMRDMVYNLPVLTPPRWVRSRTTPIALENLLHYLVALL. . DHP
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Template Sequence  YAPLLRCNAVCPATIDTPLVRKAAELEVGSDPMRIEKKISEWGHEHPM. . . . . . . . . . QRIGKPQEVASAVAFLASREAS
Template Known Secondary structure  TTTS
SBSS
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   163......170.........180.........190.........200.........210 .........220.........230..
 
   199200.........210...
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Query Sequence  ASEHRIFEAAGPEVL
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Template Sequence  FITGTCLYVDGGLSI
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   233......240.......
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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