Job Description P75822 Confidence 97.13% Date Thu Jan 5 12:14:36 GMT 2012 Rank 499 Aligned Residues 97 % Identity 21% Template c1ldbA_ PDB info PDB header:oxidoreductase(choh(d)-nad(a)) Chain: A: PDB Molecule:apo-l-lactate dehydrogenase; PDBTitle: structure determination and refinement of bacillus2 stearothermophilus lactate dehydrogenase Resolution 2.80 Å

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		1	.					.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.			.	.	30	.	.	.	.	.	.	.	.	.	40	.									.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.
Predicted Secondary structure				.	.	.	.																										.	.															.	.	.	.	.	.	.	.
Query SS confidence				.	.	.	.																										.	.															.	.	.	.	.	.	.	.
Query Sequence		M	P	.	.	.	.	Q	R	I	L	V	L	G	A	S	G	Y	I	G	Q	H	L	V	R	T	L	S	Q	Q	G	H	.	.	Q	I	L	A	A	A	R	H	V	D	R	L	A	K	.	.	.	.	.	.	.	.	L	Q	L	A	N	V	S	C	H	K	V	D	L	S	W	P	D	N	L	P	A	L	L	Q	D
Query Conservation				.	.	.	.																										.	.															.	.	.	.	.	.	.	.
Alig confidence				.	.	.	.									.																	.	.															.	.	.	.	.	.	.	.													.	.	.	.	.	.	.
Template Conservation																.																																																					.	.	.	.	.	.	.
Template Sequence		M	K	N	N	G	G	A	R	V	V	V	I	G	A	.	G	F	V	G	A	S	Y	V	F	A	L	M	N	Q	G	I	A	D	E	I	V	L	I	D	A	N	E	S	K	A	I	G	D	A	M	D	F	N	H	G	K	V	F	A	P	K	P	V	D	I	W	D	.	.	.	.	.	.	.	Y	D	D	C	R	D
Template Known Secondary structure				S			S	S								.	S												T	T	T			S							S	S															G	G	G	T	T								.	.	.	.	.	.	.	G	G	G		S	S
Template Predicted Secondary structure																.																																																					.	.	.	.	.	.	.
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.		.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80								.	.	.	.	.	.
		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	D	T	V	Y	F	L	V	H	S	M	G	E	G	G	D	F	I	A	Q	E	R	Q	V	A	L	N	V	R	D	A	L	R	E	V	P	V	K	Q	L	I	F	L
Query Conservation
Alig confidence													.	.	.	.
Template Conservation													.	.	.	.
Template Sequence		A	D	L	V	V	I	C	A	G	A	N	.	.	.	.	D	L	V	D	K	N	I	A	I	F	R	S	I	V	E	S	V	M	A	S	G	F	Q	G	L	F	L	V
Template Known Secondary structure			S										.	.	.	.																				T	T			S
Template Predicted Secondary structure													.	.	.	.
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.					100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions