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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c8jajl_

Fold library idPDB HeaderMoleculeTitle
c8jajl_3.90PDB header: viral proteinChain: L: PDB Molecule:


Added to library: Sat Jun 24 09:03:51 2023
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence QYSIQQSLGNASGVAVSPINADATLSTGVALNSSLWAGIGVFARGKPFTVLAVTESNYEDVLGEPLKPSS
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SS

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TT





SS




SSS
BTS
TTT
S


TTS
 .........80.........90.........100.........110.........120.........130.........140
Sequence GSQFEPIRHVYEAIQQTSGYVVRAVPDDAKFPIIMFDESGEPAYSALPYGSEIELDSGEAFAIYVDDGDP
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Known secondary structure (DSSP) TT
TTTS



TT
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TTSS


 .........150.........160.........170.........180.........190.........200.........210
Sequence CISPTRELTIETATADSAGNERFLLKLTQTTSLGVVTTLETHTVSLAEEAKDDMGRLCYLPTALEARSKY
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Known secondary structure (DSSP) SSSS



SS



SS

SSSS
B
SSS
B


SS
 .........220.........230.........240.........250.........260.........270.........280
Sequence LRAVVNEELISTAKVTNKKSLAFTGGTNGDQSKISTAAYLRAVKVLNNAPYMYTAVLGLGCYDNAAITAL
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GGGSSS












SS


S
SS

S

S


 .........290.........300.........310.........320.........330.........340.........350
Sequence GKICADRLIDGFFDVKPTLTYAEALPAVEDTGLLGTDYVSCSVYHYPFSCKDKWTQSRVVFGLSGVAYAA
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Known secondary structure (DSSP) T


TTS
TTT
SSS

S



B
SSS
S


S
S
 .........360.........370.........380.........390.........400.........410.........420
Sequence KARGVKKNSDVGGWHYSPAGEERAVIARASIQPLYPEDTPDEEAMVKGRLNKVSVGTSGQMIIDDALTCC
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Known secondary structure (DSSP) TT
SSS



S
S

TTT




S

B
SSTT



TT
B

TTS




BS
 .........430.........440.........450.........460.........470.........480.........490
Sequence TQDNYLHFQHVPSLMNAISRFFVQLARQMKHSPDGITAAGLTKGMTKLLDRFVASGALVAPRDPDADGTE
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Known secondary structure (DSSP) SS
SS
SSST
S

TTT
B


S
TTTS
S
 .........500.........510.........520......
Sequence PYVLKVTQAEFDKWEVVWACCPTGVARRIQGVPLLI
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Known secondary structure (DSSP) S

SSS


B














Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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